| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634464
Identifier: 110634464
GI number: 110634464
Start: 2271816
End: 2273183
Strand: Reverse
Name: 110634464
Synonym: Meso_2115
Alternate gene names: NA
Gene position: 2273183-2271816 (Counterclockwise)
Preceding gene: 110634465
Following gene: 110634463
Centisome position: 51.52
GC content: 57.24
Gene sequence:
>1368_bases ATGGCTAAGAAGAAAAGATTGTTCATCGTTGGCAACGGGCCAATGCTTTTCGACATGACGGAACGCGTGAATGCCAGCGA TCACGTCGTGCGCTTCAACGAGCCTAAAACCTCCTTCGGAATGAGCGGCACCAAGACGAACTGGTTGTTCGTCTCCAATA CCGGCAAGCCGATGGAACGGCGGCTGCGAAATCCCGATTATCCCACCTCGCCGATCGTGCAGGCGGCAGAACTCGTCTTC CTGGTGAATCACCCGATCACCGCCGACAAATATCTTCAGAAGCCAAAATTGCTTTCCCGCCTGAAGGGACGTCGTGCGGA TTATACCTGGGAAGGGCTGATGATGTATGGCAAAGCTGGTAAGACAGTTGCCGTTTTGCCGCCGGCCTTCTACGAAGCGA GCTGCCGCGATTTGGGCATTGAGCCCGAGGATTCAACCAAGCAGCGCATATTCCCCAGCACCGGATATATCGGTATTCGA TATGCGCTGGAAAAGCTGCCGGCGGATGAGTGGGAAGTCGAGATCGCAGGCTTCAGCTGGCAGGGCTGGCAGAAGCATGC CTGGGATCACGAGCGGGCGTGGATCGAGCGAAAGGTTGCAGAGCGCGACATTCGCGTTTGGCCTTCAAAGAACGACACCA GACGCAGACATTCGCAAGGAGGGATGATGGAAACGAAACTCGACATCTATATCGGCTGGGATTCACGCGAGCCGATCGCC TATGACGTTGCCAAGAAGACGATCCTTGATCGCGCGAGCGTTCCTGTCGAGGTGCATCCGATCAAGCTTTCCGACCTGGT GGAAAAGGGCGCGTATACGCGCGATATCGATCCGCTCGCGTCCACCGAGTTCACCTATTCCCGTTTCTTTACGCCGTGGC TTGCCGGCTACAAGGGCTGGGCCCTGTTCTGCGATTGCGACTTCCTGTTCCTCGATGATGTGGCGAAGTTGCTTGAATAC CGCGATTCCTCCAAGGCCGTGCTGTGCGTGAAGCATGACTATACGCCGAAGGCCACAGTGAAGATGGACGGCAAGGTGCA GACCACCTATCCGCGCAAGAACTGGTCGTCCTTCATGCTCTTCAATTGCGAGCATCCCTCGACGAAGACGCTCACGCCGG AGGTGATCAACCGCGAGACCGGCGCTTATCTTCACCGCATGCAGTGGGCCAAGGACGAGGAAATCGGCGGCATCCCCGAG GCCTGGAACTGGCTGGAGGGCTGGAGCGAGAAGCCGGAGAGCGGCACGCCCAGCGCCATCCATTTTACCAATGGCGGACC ATGGTTCAAGGATTGGCAGAACGTCGACTATGGCGATCTGTGGCGCGCGGAGGCGGACAAGGTCGATCCGAACTGGAAGC CGATTTGA
Upstream 100 bases:
>100_bases GTTGCGTGAAATGCTGAGGGCGCGCTATCGGTTTTCCGCCAAGCTGTTCGACGTTCTAAAAAGCGGGCCGAGCAACCGGG TTCGGGAGAGTTGATTCCGC
Downstream 100 bases:
>100_bases TATGTTGATGCTATCGGTCGGGTGAATAAGGGCCAGTGTGCTGCATTCCAGATGAAGATCTTCCTCATCAATCTAGACCG GCGGCCCGACCGCCTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAKKKRLFIVGNGPMLFDMTERVNASDHVVRFNEPKTSFGMSGTKTNWLFVSNTGKPMERRLRNPDYPTSPIVQAAELVF LVNHPITADKYLQKPKLLSRLKGRRADYTWEGLMMYGKAGKTVAVLPPAFYEASCRDLGIEPEDSTKQRIFPSTGYIGIR YALEKLPADEWEVEIAGFSWQGWQKHAWDHERAWIERKVAERDIRVWPSKNDTRRRHSQGGMMETKLDIYIGWDSREPIA YDVAKKTILDRASVPVEVHPIKLSDLVEKGAYTRDIDPLASTEFTYSRFFTPWLAGYKGWALFCDCDFLFLDDVAKLLEY RDSSKAVLCVKHDYTPKATVKMDGKVQTTYPRKNWSSFMLFNCEHPSTKTLTPEVINRETGAYLHRMQWAKDEEIGGIPE AWNWLEGWSEKPESGTPSAIHFTNGGPWFKDWQNVDYGDLWRAEADKVDPNWKPI
Sequences:
>Translated_455_residues MAKKKRLFIVGNGPMLFDMTERVNASDHVVRFNEPKTSFGMSGTKTNWLFVSNTGKPMERRLRNPDYPTSPIVQAAELVF LVNHPITADKYLQKPKLLSRLKGRRADYTWEGLMMYGKAGKTVAVLPPAFYEASCRDLGIEPEDSTKQRIFPSTGYIGIR YALEKLPADEWEVEIAGFSWQGWQKHAWDHERAWIERKVAERDIRVWPSKNDTRRRHSQGGMMETKLDIYIGWDSREPIA YDVAKKTILDRASVPVEVHPIKLSDLVEKGAYTRDIDPLASTEFTYSRFFTPWLAGYKGWALFCDCDFLFLDDVAKLLEY RDSSKAVLCVKHDYTPKATVKMDGKVQTTYPRKNWSSFMLFNCEHPSTKTLTPEVINRETGAYLHRMQWAKDEEIGGIPE AWNWLEGWSEKPESGTPSAIHFTNGGPWFKDWQNVDYGDLWRAEADKVDPNWKPI >Mature_454_residues AKKKRLFIVGNGPMLFDMTERVNASDHVVRFNEPKTSFGMSGTKTNWLFVSNTGKPMERRLRNPDYPTSPIVQAAELVFL VNHPITADKYLQKPKLLSRLKGRRADYTWEGLMMYGKAGKTVAVLPPAFYEASCRDLGIEPEDSTKQRIFPSTGYIGIRY ALEKLPADEWEVEIAGFSWQGWQKHAWDHERAWIERKVAERDIRVWPSKNDTRRRHSQGGMMETKLDIYIGWDSREPIAY DVAKKTILDRASVPVEVHPIKLSDLVEKGAYTRDIDPLASTEFTYSRFFTPWLAGYKGWALFCDCDFLFLDDVAKLLEYR DSSKAVLCVKHDYTPKATVKMDGKVQTTYPRKNWSSFMLFNCEHPSTKTLTPEVINRETGAYLHRMQWAKDEEIGGIPEA WNWLEGWSEKPESGTPSAIHFTNGGPWFKDWQNVDYGDLWRAEADKVDPNWKPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52525; Mature: 52394
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKRLFIVGNGPMLFDMTERVNASDHVVRFNEPKTSFGMSGTKTNWLFVSNTGKPMER CCCCEEEEEEECCCEEEEHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH RLRNPDYPTSPIVQAAELVFLVNHPITADKYLQKPKLLSRLKGRRADYTWEGLMMYGKAG HCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCC KTVAVLPPAFYEASCRDLGIEPEDSTKQRIFPSTGYIGIRYALEKLPADEWEVEIAGFSW CEEEEECCHHHCCHHHHCCCCCCCCCHHEECCCCCCCHHHHHHHHCCCCCEEEEEECCCC QGWQKHAWDHERAWIERKVAERDIRVWPSKNDTRRRHSQGGMMETKLDIYIGWDSREPIA CCCHHCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCC YDVAKKTILDRASVPVEVHPIKLSDLVEKGAYTRDIDPLASTEFTYSRFFTPWLAGYKGW HHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC ALFCDCDFLFLDDVAKLLEYRDSSKAVLCVKHDYTPKATVKMDGKVQTTYPRKNWSSFML EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCEEEECCCCCCCCEEEE FNCEHPSTKTLTPEVINRETGAYLHRMQWAKDEEIGGIPEAWNWLEGWSEKPESGTPSAI EECCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEE HFTNGGPWFKDWQNVDYGDLWRAEADKVDPNWKPI EECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure AKKKRLFIVGNGPMLFDMTERVNASDHVVRFNEPKTSFGMSGTKTNWLFVSNTGKPMER CCCEEEEEEECCCEEEEHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH RLRNPDYPTSPIVQAAELVFLVNHPITADKYLQKPKLLSRLKGRRADYTWEGLMMYGKAG HCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCC KTVAVLPPAFYEASCRDLGIEPEDSTKQRIFPSTGYIGIRYALEKLPADEWEVEIAGFSW CEEEEECCHHHCCHHHHCCCCCCCCCHHEECCCCCCCHHHHHHHHCCCCCEEEEEECCCC QGWQKHAWDHERAWIERKVAERDIRVWPSKNDTRRRHSQGGMMETKLDIYIGWDSREPIA CCCHHCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCC YDVAKKTILDRASVPVEVHPIKLSDLVEKGAYTRDIDPLASTEFTYSRFFTPWLAGYKGW HHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC ALFCDCDFLFLDDVAKLLEYRDSSKAVLCVKHDYTPKATVKMDGKVQTTYPRKNWSSFML EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCEEEECCCCCCCCEEEE FNCEHPSTKTLTPEVINRETGAYLHRMQWAKDEEIGGIPEAWNWLEGWSEKPESGTPSAI EECCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEE HFTNGGPWFKDWQNVDYGDLWRAEADKVDPNWKPI EECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA