Click here to switch to the map view.

The map label for this gene is 110634465

Identifier: 110634465

GI number: 110634465

Start: 2273190

End: 2273942

Strand: Reverse

Name: 110634465

Synonym: Meso_2116

Alternate gene names: NA

Gene position: 2273942-2273190 (Counterclockwise)

Preceding gene: 110634466

Following gene: 110634464

Centisome position: 51.53

GC content: 61.62

Gene sequence:

>753_bases
ATGAAGGTCGAGGCGTTCGTCATCCATCTCGCCCGCGCCACGGGGCGCGCGCCCCAGGTGGAGCGTTTGCGCCAGAATCT
TACGATTCCGGTCACGGTCATAGACGCCGTCGACGCCGAACAGCTTTCCGAGGAGGAAATTGTCCGGGTGTACCGGCCGG
GACTTCACCGGCCCCGCTATCCTTTTCCCTTGCGCCGCACCGAGGTCGCCTGCTTTCTCTCGCATCGCAAGGCATGGCAG
ACCATCATGGAACGCGGGCTCGATGCGGGTCTGATCATCGAAGATGACGTAGAGCTTCTGCCCGGCGTCCATCATCTTTT
CGACAGCGGGCTTGCATGCGCGACGACAAAAGATGTCCTTCGCTTTCCGAAGAAGGCGAGGGAGCGCGGGGCGGCCCTCA
ATGAAAATGGCGCGAACCGCATTTTTGAGCCTCGTTTGGTCGGGCTGGGCATGCAGGCCCAACTCGTCGGCCGCGACGCC
GCGGGTGAATTGCTCGCATTCACGCGTGAATTCGACAGGCCCGTGGACACGACGATCCAGATGCGCTGGCTGCATGGCGT
GCGTGTATTGAGCTCTTCTCCCGTCGCAATCCGCGAAGTGGCGGCGGCACTCGGCGGGACCACCGTCCAAGGAAAAGGAA
AATCGCACGCGGAAACGCTGTTGCGTGAAATGCTGAGGGCGCGCTATCGGTTTTCCGCCAAGCTGTTCGACGTTCTAAAA
AGCGGGCCGAGCAACCGGGTTCGGGAGAGTTGA

Upstream 100 bases:

>100_bases
ACGGAGAAGCTGGGCGCGCGCATGCCGTGAATAATTTTGCGCTCGCCGGGGAAGCCGCCGCGCTGCGCGAGGTTTATGAA
AGCCTCTGGGATGGCGAAAA

Downstream 100 bases:

>100_bases
TTCCGCATGGCTAAGAAGAAAAGATTGTTCATCGTTGGCAACGGGCCAATGCTTTTCGACATGACGGAACGCGTGAATGC
CAGCGATCACGTCGTGCGCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase Protein; Glycosyl Transferase

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKVEAFVIHLARATGRAPQVERLRQNLTIPVTVIDAVDAEQLSEEEIVRVYRPGLHRPRYPFPLRRTEVACFLSHRKAWQ
TIMERGLDAGLIIEDDVELLPGVHHLFDSGLACATTKDVLRFPKKARERGAALNENGANRIFEPRLVGLGMQAQLVGRDA
AGELLAFTREFDRPVDTTIQMRWLHGVRVLSSSPVAIREVAAALGGTTVQGKGKSHAETLLREMLRARYRFSAKLFDVLK
SGPSNRVRES

Sequences:

>Translated_250_residues
MKVEAFVIHLARATGRAPQVERLRQNLTIPVTVIDAVDAEQLSEEEIVRVYRPGLHRPRYPFPLRRTEVACFLSHRKAWQ
TIMERGLDAGLIIEDDVELLPGVHHLFDSGLACATTKDVLRFPKKARERGAALNENGANRIFEPRLVGLGMQAQLVGRDA
AGELLAFTREFDRPVDTTIQMRWLHGVRVLSSSPVAIREVAAALGGTTVQGKGKSHAETLLREMLRARYRFSAKLFDVLK
SGPSNRVRES
>Mature_250_residues
MKVEAFVIHLARATGRAPQVERLRQNLTIPVTVIDAVDAEQLSEEEIVRVYRPGLHRPRYPFPLRRTEVACFLSHRKAWQ
TIMERGLDAGLIIEDDVELLPGVHHLFDSGLACATTKDVLRFPKKARERGAALNENGANRIFEPRLVGLGMQAQLVGRDA
AGELLAFTREFDRPVDTTIQMRWLHGVRVLSSSPVAIREVAAALGGTTVQGKGKSHAETLLREMLRARYRFSAKLFDVLK
SGPSNRVRES

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27966; Mature: 27966

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEAFVIHLARATGRAPQVERLRQNLTIPVTVIDAVDAEQLSEEEIVRVYRPGLHRPRY
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHHHCCCCCCCCC
PFPLRRTEVACFLSHRKAWQTIMERGLDAGLIIEDDVELLPGVHHLFDSGLACATTKDVL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHH
RFPKKARERGAALNENGANRIFEPRLVGLGMQAQLVGRDAAGELLAFTREFDRPVDTTIQ
HCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHH
MRWLHGVRVLSSSPVAIREVAAALGGTTVQGKGKSHAETLLREMLRARYRFSAKLFDVLK
HHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGPSNRVRES
CCCCCCCCCC
>Mature Secondary Structure
MKVEAFVIHLARATGRAPQVERLRQNLTIPVTVIDAVDAEQLSEEEIVRVYRPGLHRPRY
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHHHCCCCCCCCC
PFPLRRTEVACFLSHRKAWQTIMERGLDAGLIIEDDVELLPGVHHLFDSGLACATTKDVL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHH
RFPKKARERGAALNENGANRIFEPRLVGLGMQAQLVGRDAAGELLAFTREFDRPVDTTIQ
HCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHH
MRWLHGVRVLSSSPVAIREVAAALGGTTVQGKGKSHAETLLREMLRARYRFSAKLFDVLK
HHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGPSNRVRES
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA