| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is pgsA [H]
Identifier: 110634326
GI number: 110634326
Start: 2118855
End: 2119463
Strand: Direct
Name: pgsA [H]
Synonym: Meso_1976
Alternate gene names: 110634326
Gene position: 2118855-2119463 (Clockwise)
Preceding gene: 110634325
Following gene: 110634327
Centisome position: 48.02
GC content: 57.8
Gene sequence:
>609_bases ATGAGCCAGCAATCCATGTCGCAACAACGCGCCTTCAACCTTCCAAACCTGCTCACTTATGCGCGCATCATGGCGGTGCC GCTGATTGTGCTTTGCTTCTTTCTTGAAGGGCGGCTGCAATCCAGCGACTTTGCCCGCTGGTCGGCGCTTGGACTGTTTC TCGCCGCAAGCGTCACCGATTACCTGGATGGCTATCTCGCGCGAAGCTGGAAGCAAACCTCCAATATCGGCAGAATGCTG GACCCGATTGCCGACAAGCTGCTCGTGGCAACCTGCCTTCTCCTTCTTGCCGCTGATACGGATCGCACGATCGCAGGCTG GACGCTCTGGGCCGCGATCGTCATCCTGTGCCGGGAGATCCTGGTATCGGGCTTGAGAGAATATCTTGCCGGGCTGAAGG TGAGCGTGCCGGTAACACAGCTTGCCAAATGGAAGACAGCCATCCAGATGGTGGCGATCGGCTTCCTCCTCGCCGGCCCT GCCGGTGACAAGATCGTCCCCTATATAACCGAGACCGGCATCGCGCTTTTGTGGTTTTCCGCGCTCGTGACGCTCTATAC CGGCTACGATTATTTCCGCGCCGGCTTGAAGCATATCATCGAGGAATAG
Upstream 100 bases:
>100_bases GGAATCCATAGCCCGGCTGATTTACAATCACTTTCATGAGAGTGGCTAGTGACCAGCCGCTTGACCGCGGTCTACCTGGT CTGATTTGACTAGGCCGACA
Downstream 100 bases:
>100_bases CATGAAGCTCATCTATTTCGCATGGGTCCGGGAGCGCATTGGTAAGGAGACCGAGGAGGTTACCTTGCCAGGTGAGGTGA GGACGGTTGCGGAGCTTCTT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSQQSMSQQRAFNLPNLLTYARIMAVPLIVLCFFLEGRLQSSDFARWSALGLFLAASVTDYLDGYLARSWKQTSNIGRML DPIADKLLVATCLLLLAADTDRTIAGWTLWAAIVILCREILVSGLREYLAGLKVSVPVTQLAKWKTAIQMVAIGFLLAGP AGDKIVPYITETGIALLWFSALVTLYTGYDYFRAGLKHIIEE
Sequences:
>Translated_202_residues MSQQSMSQQRAFNLPNLLTYARIMAVPLIVLCFFLEGRLQSSDFARWSALGLFLAASVTDYLDGYLARSWKQTSNIGRML DPIADKLLVATCLLLLAADTDRTIAGWTLWAAIVILCREILVSGLREYLAGLKVSVPVTQLAKWKTAIQMVAIGFLLAGP AGDKIVPYITETGIALLWFSALVTLYTGYDYFRAGLKHIIEE >Mature_201_residues SQQSMSQQRAFNLPNLLTYARIMAVPLIVLCFFLEGRLQSSDFARWSALGLFLAASVTDYLDGYLARSWKQTSNIGRMLD PIADKLLVATCLLLLAADTDRTIAGWTLWAAIVILCREILVSGLREYLAGLKVSVPVTQLAKWKTAIQMVAIGFLLAGPA GDKIVPYITETGIALLWFSALVTLYTGYDYFRAGLKHIIEE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=193, Percent_Identity=37.8238341968912, Blast_Score=119, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320059, Length=175, Percent_Identity=33.1428571428571, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 22369; Mature: 22237
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQSMSQQRAFNLPNLLTYARIMAVPLIVLCFFLEGRLQSSDFARWSALGLFLAASVTD CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YLDGYLARSWKQTSNIGRMLDPIADKLLVATCLLLLAADTDRTIAGWTLWAAIVILCREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVSGLREYLAGLKVSVPVTQLAKWKTAIQMVAIGFLLAGPAGDKIVPYITETGIALLWFS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ALVTLYTGYDYFRAGLKHIIEE HHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure SQQSMSQQRAFNLPNLLTYARIMAVPLIVLCFFLEGRLQSSDFARWSALGLFLAASVTD CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YLDGYLARSWKQTSNIGRMLDPIADKLLVATCLLLLAADTDRTIAGWTLWAAIVILCREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVSGLREYLAGLKVSVPVTQLAKWKTAIQMVAIGFLLAGPAGDKIVPYITETGIALLWFS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ALVTLYTGYDYFRAGLKHIIEE HHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA