Click here to switch to the map view.

The map label for this gene is yfgE [C]

Identifier: 110634313

GI number: 110634313

Start: 2104408

End: 2105109

Strand: Reverse

Name: yfgE [C]

Synonym: Meso_1963

Alternate gene names: 110634313

Gene position: 2105109-2104408 (Counterclockwise)

Preceding gene: 110634314

Following gene: 110634312

Centisome position: 47.71

GC content: 65.1

Gene sequence:

>702_bases
ATGGCAAGAGGCCTGTCGCCGCGGCAATTGCCACTCGATCTCGCCCATACCGAGGGCCGGTCGCGCGAAGACCTCGTGGT
CACGCCCGCCAACGAGCTTGCAGTCGCATTGGTGGAGAGCTGGCCCGATTGGCCCGCTCCGATCGTGGTACTGGCTGGTC
CGGCCGGATCCGGCAAGACCCATCTCGCCGACATCTGGTGCGACCAATCGGGCGCCTTTCCCGTCTCAGCCACGGCCATC
GAAACGGAGGCAATGGCCGCCGCGGAGCATGGGCCGATCCTGATCGACGACGCCGACAGTCCCCTGCTCGACGAGACCGG
CCTCTTTCATCTGATCAATATGGTGCGCGGCAGTCATACGCACCTGCTTCTCACCGCACGGCACTTGCCGTCCGCCTGGG
GCGTGAAGCTGCCGGATCTGCTTTCGCGGCTGAAGGCGGCGGCGGCCGTCGAGATCCGTGAGCCGGACGACATGCTGCTC
ACCGGCGTTTTCATCAAGCTTTTCGCGGACCGCCAGGTGGCGGTGGAGCCTCATGTCGTGCAATTCATGCTCCGCCGCAT
GGAGCGCTCGCTTTCCGCCGCCCGGCGCATCGTCGAGCGTCTTGATCGGGTGGCGCTTGAACGCAAGATCCGCATCTCCC
GGACCCTCGCAGCCGAAATTCTGGAAGGTATGGACGAGGGGCAGGGCAGTCTCGACCTCTAA

Upstream 100 bases:

>100_bases
TCGCCGTTCTCGTCCGCTTTGCAATTTCCCGCTATCTCGCTTCGCCATTATACGGTGGCCATCCGTCTCTTCCGGCCGAG
CAGAAAGGCCGTGATCTTTG

Downstream 100 bases:

>100_bases
CCATGCTTTGCGCTTTGTGAAGACAAATCAGTCGGCATAGGGAACACGGGCGAGCATTCGAGGTTCGGTTGCCGTGCGTT
GAAAGGCACGAAACGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; DNAA-Like Protein; Regulatory Inactivation Of DNAA Hda Protein; ATPase; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase Involved In DNA Replication Initiation; Chromosomal DNA Replication Initiator-Related Protein; ATPase-Like Protein Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; DNA Replication Initiation Factor; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MARGLSPRQLPLDLAHTEGRSREDLVVTPANELAVALVESWPDWPAPIVVLAGPAGSGKTHLADIWCDQSGAFPVSATAI
ETEAMAAAEHGPILIDDADSPLLDETGLFHLINMVRGSHTHLLLTARHLPSAWGVKLPDLLSRLKAAAAVEIREPDDMLL
TGVFIKLFADRQVAVEPHVVQFMLRRMERSLSAARRIVERLDRVALERKIRISRTLAAEILEGMDEGQGSLDL

Sequences:

>Translated_233_residues
MARGLSPRQLPLDLAHTEGRSREDLVVTPANELAVALVESWPDWPAPIVVLAGPAGSGKTHLADIWCDQSGAFPVSATAI
ETEAMAAAEHGPILIDDADSPLLDETGLFHLINMVRGSHTHLLLTARHLPSAWGVKLPDLLSRLKAAAAVEIREPDDMLL
TGVFIKLFADRQVAVEPHVVQFMLRRMERSLSAARRIVERLDRVALERKIRISRTLAAEILEGMDEGQGSLDL
>Mature_232_residues
ARGLSPRQLPLDLAHTEGRSREDLVVTPANELAVALVESWPDWPAPIVVLAGPAGSGKTHLADIWCDQSGAFPVSATAIE
TEAMAAAEHGPILIDDADSPLLDETGLFHLINMVRGSHTHLLLTARHLPSAWGVKLPDLLSRLKAAAAVEIREPDDMLLT
GVFIKLFADRQVAVEPHVVQFMLRRMERSLSAARRIVERLDRVALERKIRISRTLAAEILEGMDEGQGSLDL

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25430; Mature: 25298

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGLSPRQLPLDLAHTEGRSREDLVVTPANELAVALVESWPDWPAPIVVLAGPAGSGKT
CCCCCCCCCCCCEECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
HLADIWCDQSGAFPVSATAIETEAMAAAEHGPILIDDADSPLLDETGLFHLINMVRGSHT
EEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
HLLLTARHLPSAWGVKLPDLLSRLKAAAAVEIREPDDMLLTGVFIKLFADRQVAVEPHVV
EEEEEECCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCEECCHHHH
QFMLRRMERSLSAARRIVERLDRVALERKIRISRTLAAEILEGMDEGQGSLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ARGLSPRQLPLDLAHTEGRSREDLVVTPANELAVALVESWPDWPAPIVVLAGPAGSGKT
CCCCCCCCCCCEECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
HLADIWCDQSGAFPVSATAIETEAMAAAEHGPILIDDADSPLLDETGLFHLINMVRGSHT
EEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
HLLLTARHLPSAWGVKLPDLLSRLKAAAAVEIREPDDMLLTGVFIKLFADRQVAVEPHVV
EEEEEECCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCEECCHHHH
QFMLRRMERSLSAARRIVERLDRVALERKIRISRTLAAEILEGMDEGQGSLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA