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The map label for this gene is 110634255

Identifier: 110634255

GI number: 110634255

Start: 2041525

End: 2042928

Strand: Direct

Name: 110634255

Synonym: Meso_1905

Alternate gene names: NA

Gene position: 2041525-2042928 (Clockwise)

Preceding gene: 110634254

Following gene: 110634256

Centisome position: 46.27

GC content: 65.03

Gene sequence:

>1404_bases
ATGCGTTTTACACGTATCCTGGCGGCGGTTCTGATACTGATCCTCATCGTGGCAGTGGGATTTTTTGCGCTTGCATGGCG
CAGCGAGATCAAGCCGGTCGCGGCCGCCGATCCGTCCTCCTTCAGCGAGGATCTCGTCCAGCAGGGAGCCCGGCTTGCAG
CCGTCGGCAACTGCATCGCCTGCCACACGGTGCCTGGCCAGCCTGCTTTTGCCGGCGGCCTGGCGCTTCCCACGCCCTTC
GGCACGATCCACTCGACGAACATAACCCCGGATCCTGAGACGGGCATTGGCAACTGGAGCGAGGAAGCCTTCCAGCGCGC
CATGCGCGAAGGGGTGGACCGGGAGGGCCGCCATCTCTACCCCGCCTTTCCCTACGATCACTACACACGGGTGACGGACG
AGGACAACAGGGCGCTCTATGCCTTTCTCATGACGCGCGAGCCGGTGCGCTCCACACCGCCCGAAAACGATCTGCCCTTC
CCCTACAACCTGCGGCCGATCCTTGCCGGCTGGAAGCTGCTCTTCCTGGATAAGGGACCGTTCCAGCCCGATACGGCACA
AAGCGAGGAGTGGAACCGCGGCGCCTACCTGGCCGAGGGTCTTGGCCATTGCGGGGCCTGCCACACACCGCGCAACCGGT
TCGGCGCCGTCGAATCGGACCGTCATTTCGGCGGCGGCGAGGCGGAAGGCTGGCAGGCCTATGCCATAAACGCAAACTCG
CCCGCGCCTATCCCGTGGGACACGGACAGCCTGGCCTTCTACCTGCGCAATGGCTGGCATCAGTGGCATGGCGTCTCCCG
CGGCCCGATGGCCGAGGTCACCGGCAATCTCGGCCTTCTTCCGGACAGCGACATCGTTGCCATTGCGACCTATGTCGCCT
CGGTGATGGGCGAGCCGGATGAGGCACGCCGCGCCCGCGCCGAGGAATTGATGGCGCAGGCTGCCGAAGGGCCGGGCGAG
GTGCAGGCTGCGCCGGCGGTCGACACGCAGGCTGGAGCCGGCAATCCGCAGGACCGAGGCGCCCTCATCTACGCCAGCGC
CTGCGCGGGTTGCCATAATGGCAGCAAGCCCCAGCCTTTTGGCGGTCTACGCTTTTCTCTCAGCACCGCCGTAAATGCGC
CCAACCCGCAGAATATCGTGAATGTGGTGCTCTTCGGCCTGCCGCCGTCCGATGGACAGGCGAGCGCGGTGATGCCTGCT
TTCGCGAATGTGCTCAGCGATCAGGACGTGGCCGACCTGCTCGCTCATATGCGTGAGCAATATTCCGATGCGCCGGCGTG
GGAGAATCTCGTCGATTTGGTCGCCCGTACGCGCTCGGGCGAGTACAAAGTGGTTATCCTGCCGGCAGACGGCATCGAAA
GAGGGCCGGAAAACGTAGGCGCCAGCGATGGCGCGGAGGAGTAG

Upstream 100 bases:

>100_bases
CCGGCGTCTGACGACCTAGCCGGGATGCGGCATATATAGCGAAGTGGCCGGCCTCCCGGCTGACTTTCGCAGTGGTGCAG
ACGGGCGAGGAGACCGATCG

Downstream 100 bases:

>100_bases
GTCATGGCGATATCCCTGAACGTCAATGGCGAAACGCACGAGGTCGATGTCGATCCCGCGACGCCGCTTCTTTATGTGCT
GCGAAACGATCTTGAGCTGA

Product: cytochrome c, class I

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRFTRILAAVLILILIVAVGFFALAWRSEIKPVAAADPSSFSEDLVQQGARLAAVGNCIACHTVPGQPAFAGGLALPTPF
GTIHSTNITPDPETGIGNWSEEAFQRAMREGVDREGRHLYPAFPYDHYTRVTDEDNRALYAFLMTREPVRSTPPENDLPF
PYNLRPILAGWKLLFLDKGPFQPDTAQSEEWNRGAYLAEGLGHCGACHTPRNRFGAVESDRHFGGGEAEGWQAYAINANS
PAPIPWDTDSLAFYLRNGWHQWHGVSRGPMAEVTGNLGLLPDSDIVAIATYVASVMGEPDEARRARAEELMAQAAEGPGE
VQAAPAVDTQAGAGNPQDRGALIYASACAGCHNGSKPQPFGGLRFSLSTAVNAPNPQNIVNVVLFGLPPSDGQASAVMPA
FANVLSDQDVADLLAHMREQYSDAPAWENLVDLVARTRSGEYKVVILPADGIERGPENVGASDGAEE

Sequences:

>Translated_467_residues
MRFTRILAAVLILILIVAVGFFALAWRSEIKPVAAADPSSFSEDLVQQGARLAAVGNCIACHTVPGQPAFAGGLALPTPF
GTIHSTNITPDPETGIGNWSEEAFQRAMREGVDREGRHLYPAFPYDHYTRVTDEDNRALYAFLMTREPVRSTPPENDLPF
PYNLRPILAGWKLLFLDKGPFQPDTAQSEEWNRGAYLAEGLGHCGACHTPRNRFGAVESDRHFGGGEAEGWQAYAINANS
PAPIPWDTDSLAFYLRNGWHQWHGVSRGPMAEVTGNLGLLPDSDIVAIATYVASVMGEPDEARRARAEELMAQAAEGPGE
VQAAPAVDTQAGAGNPQDRGALIYASACAGCHNGSKPQPFGGLRFSLSTAVNAPNPQNIVNVVLFGLPPSDGQASAVMPA
FANVLSDQDVADLLAHMREQYSDAPAWENLVDLVARTRSGEYKVVILPADGIERGPENVGASDGAEE
>Mature_467_residues
MRFTRILAAVLILILIVAVGFFALAWRSEIKPVAAADPSSFSEDLVQQGARLAAVGNCIACHTVPGQPAFAGGLALPTPF
GTIHSTNITPDPETGIGNWSEEAFQRAMREGVDREGRHLYPAFPYDHYTRVTDEDNRALYAFLMTREPVRSTPPENDLPF
PYNLRPILAGWKLLFLDKGPFQPDTAQSEEWNRGAYLAEGLGHCGACHTPRNRFGAVESDRHFGGGEAEGWQAYAINANS
PAPIPWDTDSLAFYLRNGWHQWHGVSRGPMAEVTGNLGLLPDSDIVAIATYVASVMGEPDEARRARAEELMAQAAEGPGE
VQAAPAVDTQAGAGNPQDRGALIYASACAGCHNGSKPQPFGGLRFSLSTAVNAPNPQNIVNVVLFGLPPSDGQASAVMPA
FANVLSDQDVADLLAHMREQYSDAPAWENLVDLVARTRSGEYKVVILPADGIERGPENVGASDGAEE

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 50109; Mature: 50109

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTRILAAVLILILIVAVGFFALAWRSEIKPVAAADPSSFSEDLVQQGARLAAVGNCIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCEEE
CHTVPGQPAFAGGLALPTPFGTIHSTNITPDPETGIGNWSEEAFQRAMREGVDREGRHLY
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEC
PAFPYDHYTRVTDEDNRALYAFLMTREPVRSTPPENDLPFPYNLRPILAGWKLLFLDKGP
CCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCC
FQPDTAQSEEWNRGAYLAEGLGHCGACHTPRNRFGAVESDRHFGGGEAEGWQAYAINANS
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
PAPIPWDTDSLAFYLRNGWHQWHGVSRGPMAEVTGNLGLLPDSDIVAIATYVASVMGEPD
CCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
EARRARAEELMAQAAEGPGEVQAAPAVDTQAGAGNPQDRGALIYASACAGCHNGSKPQPF
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCC
GGLRFSLSTAVNAPNPQNIVNVVLFGLPPSDGQASAVMPAFANVLSDQDVADLLAHMREQ
CCEEEEEECCCCCCCHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
YSDAPAWENLVDLVARTRSGEYKVVILPADGIERGPENVGASDGAEE
HCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFTRILAAVLILILIVAVGFFALAWRSEIKPVAAADPSSFSEDLVQQGARLAAVGNCIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCEEE
CHTVPGQPAFAGGLALPTPFGTIHSTNITPDPETGIGNWSEEAFQRAMREGVDREGRHLY
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEC
PAFPYDHYTRVTDEDNRALYAFLMTREPVRSTPPENDLPFPYNLRPILAGWKLLFLDKGP
CCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCC
FQPDTAQSEEWNRGAYLAEGLGHCGACHTPRNRFGAVESDRHFGGGEAEGWQAYAINANS
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
PAPIPWDTDSLAFYLRNGWHQWHGVSRGPMAEVTGNLGLLPDSDIVAIATYVASVMGEPD
CCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
EARRARAEELMAQAAEGPGEVQAAPAVDTQAGAGNPQDRGALIYASACAGCHNGSKPQPF
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCC
GGLRFSLSTAVNAPNPQNIVNVVLFGLPPSDGQASAVMPAFANVLSDQDVADLLAHMREQ
CCEEEEEECCCCCCCHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
YSDAPAWENLVDLVARTRSGEYKVVILPADGIERGPENVGASDGAEE
HCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]