| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is iorA [H]
Identifier: 110634256
GI number: 110634256
Start: 2042932
End: 2043426
Strand: Direct
Name: iorA [H]
Synonym: Meso_1906
Alternate gene names: 110634256
Gene position: 2042932-2043426 (Clockwise)
Preceding gene: 110634255
Following gene: 110634257
Centisome position: 46.3
GC content: 63.84
Gene sequence:
>495_bases ATGGCGATATCCCTGAACGTCAATGGCGAAACGCACGAGGTCGATGTCGATCCCGCGACGCCGCTTCTTTATGTGCTGCG AAACGATCTTGAGCTGAACGGCGCCAAGTTCGGCTGCGGCCTCGGCCAGTGCGGTTCCTGCACGGTGGTGGTCGATGGCG CAGCGGTCCTGTCCTGCGTCACCCCTGTCTCGCTGATGGAAGGCCGGGAGATCACCACGGTGGAAGGGCTGGGCACGATC GAGGAGCCCGGTCCGCTGCAAACCGCCTTCATCGAGATGCAGGCCGCCCAATGCGGCTATTGCATTCCCGGCATGATGAT GAGCGCTCATGCGCTGCTGACCAGAAACCAGCAGCCCAGCGACCGGGAAATCCGCGACGCGCTCATGACCAATCTGTGCC GCTGCGGCACGCATATGCGCATCATGGCGGCGATCCGCCGTGCGGGCGAGTTGATGCAGCAAGCGGCTGCCCCGAGCGAG AGGAGGGCCGGATAA
Upstream 100 bases:
>100_bases TACGCGCTCGGGCGAGTACAAAGTGGTTATCCTGCCGGCAGACGGCATCGAAAGAGGGCCGGAAAACGTAGGCGCCAGCG ATGGCGCGGAGGAGTAGGTC
Downstream 100 bases:
>100_bases TGACCATTGTTCCAAAAGACGGCTTCACCCGCAAAGGGCTCACCCGCCGCAGCGTCCTGACCGGCACCGGCGCACTCGTC GTCAGCTTCGCGCTTGCCCC
Product: (2Fe-2S)-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAISLNVNGETHEVDVDPATPLLYVLRNDLELNGAKFGCGLGQCGSCTVVVDGAAVLSCVTPVSLMEGREITTVEGLGTI EEPGPLQTAFIEMQAAQCGYCIPGMMMSAHALLTRNQQPSDREIRDALMTNLCRCGTHMRIMAAIRRAGELMQQAAAPSE RRAG
Sequences:
>Translated_164_residues MAISLNVNGETHEVDVDPATPLLYVLRNDLELNGAKFGCGLGQCGSCTVVVDGAAVLSCVTPVSLMEGREITTVEGLGTI EEPGPLQTAFIEMQAAQCGYCIPGMMMSAHALLTRNQQPSDREIRDALMTNLCRCGTHMRIMAAIRRAGELMQQAAAPSE RRAG >Mature_163_residues AISLNVNGETHEVDVDPATPLLYVLRNDLELNGAKFGCGLGQCGSCTVVVDGAAVLSCVTPVSLMEGREITTVEGLGTIE EPGPLQTAFIEMQAAQCGYCIPGMMMSAHALLTRNQQPSDREIRDALMTNLCRCGTHMRIMAAIRRAGELMQQAAAPSER RAG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=152, Percent_Identity=36.8421052631579, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI71773480, Length=154, Percent_Identity=37.6623376623377, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1786480, Length=167, Percent_Identity=42.5149700598802, Blast_Score=124, Evalue=3e-30, Organism=Escherichia coli, GI1789232, Length=147, Percent_Identity=37.4149659863946, Blast_Score=98, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=40, Blast_Score=114, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32566215, Length=155, Percent_Identity=39.3548387096774, Blast_Score=112, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17540638, Length=149, Percent_Identity=37.5838926174497, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=40.7894736842105, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=37.2670807453416, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=37.2670807453416, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647199, Length=156, Percent_Identity=32.6923076923077, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=30.3225806451613, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17480; Mature: 17349
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISLNVNGETHEVDVDPATPLLYVLRNDLELNGAKFGCGLGQCGSCTVVVDGAAVLSCV CEEEEECCCCCEEEECCCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECCHHHHHHH TPVSLMEGREITTVEGLGTIEEPGPLQTAFIEMQAAQCGYCIPGMMMSAHALLTRNQQPS CHHHHHCCCCEEEECCCCCCCCCCCCHHHHEEHHHHCCCCCCHHHHHHHHHHHHCCCCCC DREIRDALMTNLCRCGTHMRIMAAIRRAGELMQQAAAPSERRAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AISLNVNGETHEVDVDPATPLLYVLRNDLELNGAKFGCGLGQCGSCTVVVDGAAVLSCV EEEEECCCCCEEEECCCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECCHHHHHHH TPVSLMEGREITTVEGLGTIEEPGPLQTAFIEMQAAQCGYCIPGMMMSAHALLTRNQQPS CHHHHHCCCCEEEECCCCCCCCCCCCHHHHEEHHHHCCCCCCHHHHHHHHHHHHCCCCCC DREIRDALMTNLCRCGTHMRIMAAIRRAGELMQQAAAPSERRAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]