| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634234
Identifier: 110634234
GI number: 110634234
Start: 2023404
End: 2025839
Strand: Reverse
Name: 110634234
Synonym: Meso_1884
Alternate gene names: NA
Gene position: 2025839-2023404 (Counterclockwise)
Preceding gene: 110634235
Following gene: 110634233
Centisome position: 45.91
GC content: 58.54
Gene sequence:
>2436_bases ATGGCAACCGAAGAAGAACGCCTTATCGTCTCGCTTGAAGCGAGGATGAACCAATTTGAGAAGAATTTCGCGAAAGCCAA CCGCACCGCAAACGACAATTTCGCCAAGATCGAGCGCCGCGCGAAGGAGTCGGGCGACCGACTTGAAACCTATCTTGGCA AGTCCACGGCCAATATAGCGAACAACTTCGCGGCGCTCGCCAGCAAGGCGACCATCGGCGTTACCGTTATGGCCGGCATC GTCACGGCATTTCGGCAGGTGGCAGGTTCCATTGCCGAGGTGGATAGGGAAGCCCGCAAGGCTGGAGTGACGGCGAAGAC TTGGCAGCAATGGCAATATGTTGCGACCGCGACCGGCGCGAGCGTTGACGGCGTTACCGATGCCTTGAAAGAGTTGAACA TTCGCGGTGACGAGTTCGCCAAAACTGGCAATGGCAGCGCGAAAGCCGCTTTCGAGGCGCTAGGCTACACTGCCGAGGAA GTCGCGAAGAAGCTGAAAGACCCCAGCCGGTTTCTTGACGAGATCATAGGTAAGCTTCAGACGCTCGACGCCGCCGCACG CACCCGCATCCTTGATGACATGTTCGGCGGCACTGGCGCTGAAGAAATGGCTAAAGTTCTTGGTGCGTCCGTGGCAGAAA TCCAGCGCATGCGCACCGAGGCCGCGACCTTCACTGATGAGCAGATTGAAGCGGCAAAGAAGATCGATGCCGAGTTCAAC AAGATTTGGCGCAATTTTACCGTCTACGCGAAAAAAGCAGCGATTGAGAGCGTCGGCATTCTTGGACAGATCAAAAGCTT CCTTGGTGGTGAATGGCTTCCCGGCTATGACCAGATGGAGGAAAATCGCCGCTATTACGGTTCCGACGAGTTCCGGCTGA AGCGCCTTCAGGATGAGCGCGCGAACCTTTTGCGACAGATCGAGGACACGGAATCTTTTCCAGACAGTCAGGCGAAGGAT TTCAACCTGCAATCTTTCCGCCGACAGCTTGAAGAGGTTGACGCGGAAATTGCGAATCTGACCGGCACGGGGGAGGGGCT TGACCAATCCCTTGACCAGCTTGGGGACACGACGCAACAGACAGGCGGCACCTTCGATAGCGCCGCGACCAGTGCAGCGA ACTTCCAAACAGCGCTGGAAGAGCTGAAGGAACTTGTGCCGGACCTGAAGGCCGAACTGGACACGCTCGCTCAATCCGAC GCGATTGAAACCGCCTACCGGAAAGCTGCCGATGCTGCAAAGAACCGACAGGAATATGAAGCGGCAGGCCGTTGGCGGGA CCGTGCTAGGGCATCGGCAGAGATCGAAGCACTTTCCGGCGATGTCATGGCACGGGGTAGGAAGGTCTACAGCCTTCTAC GCGACCAAGGACTAAGCCATGCCGCTGCCGCTGGCATCACCGGCAATGCATACCAAGAAAGCCGTTTTGACCCGACCGCA ATGGGCGACGGCGGTACGTCTCACGGCCTGTTTCAGCATCACGGTCCCCGAATGAATGACCTGTTGGCCTTCGGAGGCCG AGACAATGCCGCTATGCAGGTGGCCTTTGCCGTGCAGGAAATGCGCCGCAGCGGCCTGTTTGGCCGCATTAACTCTCTGT CCGATCCTGCTGAAGCTGCACGACTGTTTATGACTGAGTTCGAGCGTCCGCACCCCGACCATGCGAACCTCGCCGCACGA CAAGGGTTTGCCCGCGTTGCTGGCGGCTGGGGCGATCCCGGCATGTGGGAAATGCCGAAGATTCCGGCCCCGGATATCGA CCCGTGGGAAAACCTTCGCGAAGTTACCAGCGGCGTTAAAGACAACTTGTCCGATACGACCACGCAGGCCGAACAACTCG GCAGTATCGCCGGGACGGCTATTTCCGGCCTTGTGAGTGCCCTTGCAGACGGCAAAATTACCGCCCAAGAGTTCTCGCAA ATTCTTGCCCAGATCGCGCAACAGCTCCTCCAGATGGCGTTTAGCGGCATGCAAAAAGGCGCTCTGGCAGGCGGCAACAA CTTCCTCGCCGGCCTGCTGGGTGGTCTATTGGGCTTCTCTGGCGGTGGCAAGGTCTCAGGACCTGGCACCGGCACAAGCG ACAGCATTCCCGCCCGTCTCTCCGATGGCGAGTTTGTGGTGAAAGCATCCGAAGCCCGCAAGCACGGCGCATTGCTCGAA GCCATCAACTCGGGCCGCGTGGCATCCTTTGCCGAAGGCGGTCACGTGGGCAGCACAACCGGCCTTGCCCGATCAATTGC CTCAACCAACAACACCACCTTTGCCCCGTCCATTGCGATCAATGTGGAAGGCGGTTCGCGCGGACCGGAAGCCGACAAGG CCATGGCAGAACAGATCGCCAAGGAGACGCGTGCCGCAATTCGCAAGGAAATGGCCGAGTTCGCACAAGACCAGATGCGG GCCGGCGGTCTCTTCAGTCAGAGGAAGACACACTAA
Upstream 100 bases:
>100_bases GGCGAAGGCGATGTACGTTCGATTTTCGATGACCCGAAGGTCACCGCTCAAGACCTTGTGTGGTGAATTTTGCAACGGGT TTCAAATCTGAGGTAATCCC
Downstream 100 bases:
>100_bases TGGCCTACCCTGTTTTCACCCCACCCGGCATCGTCGACATTTCTCCCGGCTCCACACTGACCGTAAAGCCCCGCGTGCGC CGGGCAGGGTTCGGCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MATEEERLIVSLEARMNQFEKNFAKANRTANDNFAKIERRAKESGDRLETYLGKSTANIANNFAALASKATIGVTVMAGI VTAFRQVAGSIAEVDREARKAGVTAKTWQQWQYVATATGASVDGVTDALKELNIRGDEFAKTGNGSAKAAFEALGYTAEE VAKKLKDPSRFLDEIIGKLQTLDAAARTRILDDMFGGTGAEEMAKVLGASVAEIQRMRTEAATFTDEQIEAAKKIDAEFN KIWRNFTVYAKKAAIESVGILGQIKSFLGGEWLPGYDQMEENRRYYGSDEFRLKRLQDERANLLRQIEDTESFPDSQAKD FNLQSFRRQLEEVDAEIANLTGTGEGLDQSLDQLGDTTQQTGGTFDSAATSAANFQTALEELKELVPDLKAELDTLAQSD AIETAYRKAADAAKNRQEYEAAGRWRDRARASAEIEALSGDVMARGRKVYSLLRDQGLSHAAAAGITGNAYQESRFDPTA MGDGGTSHGLFQHHGPRMNDLLAFGGRDNAAMQVAFAVQEMRRSGLFGRINSLSDPAEAARLFMTEFERPHPDHANLAAR QGFARVAGGWGDPGMWEMPKIPAPDIDPWENLREVTSGVKDNLSDTTTQAEQLGSIAGTAISGLVSALADGKITAQEFSQ ILAQIAQQLLQMAFSGMQKGALAGGNNFLAGLLGGLLGFSGGGKVSGPGTGTSDSIPARLSDGEFVVKASEARKHGALLE AINSGRVASFAEGGHVGSTTGLARSIASTNNTTFAPSIAINVEGGSRGPEADKAMAEQIAKETRAAIRKEMAEFAQDQMR AGGLFSQRKTH
Sequences:
>Translated_811_residues MATEEERLIVSLEARMNQFEKNFAKANRTANDNFAKIERRAKESGDRLETYLGKSTANIANNFAALASKATIGVTVMAGI VTAFRQVAGSIAEVDREARKAGVTAKTWQQWQYVATATGASVDGVTDALKELNIRGDEFAKTGNGSAKAAFEALGYTAEE VAKKLKDPSRFLDEIIGKLQTLDAAARTRILDDMFGGTGAEEMAKVLGASVAEIQRMRTEAATFTDEQIEAAKKIDAEFN KIWRNFTVYAKKAAIESVGILGQIKSFLGGEWLPGYDQMEENRRYYGSDEFRLKRLQDERANLLRQIEDTESFPDSQAKD FNLQSFRRQLEEVDAEIANLTGTGEGLDQSLDQLGDTTQQTGGTFDSAATSAANFQTALEELKELVPDLKAELDTLAQSD AIETAYRKAADAAKNRQEYEAAGRWRDRARASAEIEALSGDVMARGRKVYSLLRDQGLSHAAAAGITGNAYQESRFDPTA MGDGGTSHGLFQHHGPRMNDLLAFGGRDNAAMQVAFAVQEMRRSGLFGRINSLSDPAEAARLFMTEFERPHPDHANLAAR QGFARVAGGWGDPGMWEMPKIPAPDIDPWENLREVTSGVKDNLSDTTTQAEQLGSIAGTAISGLVSALADGKITAQEFSQ ILAQIAQQLLQMAFSGMQKGALAGGNNFLAGLLGGLLGFSGGGKVSGPGTGTSDSIPARLSDGEFVVKASEARKHGALLE AINSGRVASFAEGGHVGSTTGLARSIASTNNTTFAPSIAINVEGGSRGPEADKAMAEQIAKETRAAIRKEMAEFAQDQMR AGGLFSQRKTH >Mature_810_residues ATEEERLIVSLEARMNQFEKNFAKANRTANDNFAKIERRAKESGDRLETYLGKSTANIANNFAALASKATIGVTVMAGIV TAFRQVAGSIAEVDREARKAGVTAKTWQQWQYVATATGASVDGVTDALKELNIRGDEFAKTGNGSAKAAFEALGYTAEEV AKKLKDPSRFLDEIIGKLQTLDAAARTRILDDMFGGTGAEEMAKVLGASVAEIQRMRTEAATFTDEQIEAAKKIDAEFNK IWRNFTVYAKKAAIESVGILGQIKSFLGGEWLPGYDQMEENRRYYGSDEFRLKRLQDERANLLRQIEDTESFPDSQAKDF NLQSFRRQLEEVDAEIANLTGTGEGLDQSLDQLGDTTQQTGGTFDSAATSAANFQTALEELKELVPDLKAELDTLAQSDA IETAYRKAADAAKNRQEYEAAGRWRDRARASAEIEALSGDVMARGRKVYSLLRDQGLSHAAAAGITGNAYQESRFDPTAM GDGGTSHGLFQHHGPRMNDLLAFGGRDNAAMQVAFAVQEMRRSGLFGRINSLSDPAEAARLFMTEFERPHPDHANLAARQ GFARVAGGWGDPGMWEMPKIPAPDIDPWENLREVTSGVKDNLSDTTTQAEQLGSIAGTAISGLVSALADGKITAQEFSQI LAQIAQQLLQMAFSGMQKGALAGGNNFLAGLLGGLLGFSGGGKVSGPGTGTSDSIPARLSDGEFVVKASEARKHGALLEA INSGRVASFAEGGHVGSTTGLARSIASTNNTTFAPSIAINVEGGSRGPEADKAMAEQIAKETRAAIRKEMAEFAQDQMRA GGLFSQRKTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87124; Mature: 86993
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEEERLIVSLEARMNQFEKNFAKANRTANDNFAKIERRAKESGDRLETYLGKSTANIA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHH NNFAALASKATIGVTVMAGIVTAFRQVAGSIAEVDREARKAGVTAKTWQQWQYVATATGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SVDGVTDALKELNIRGDEFAKTGNGSAKAAFEALGYTAEEVAKKLKDPSRFLDEIIGKLQ CHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH TLDAAARTRILDDMFGGTGAEEMAKVLGASVAEIQRMRTEAATFTDEQIEAAKKIDAEFN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KIWRNFTVYAKKAAIESVGILGQIKSFLGGEWLPGYDQMEENRRYYGSDEFRLKRLQDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH ANLLRQIEDTESFPDSQAKDFNLQSFRRQLEEVDAEIANLTGTGEGLDQSLDQLGDTTQQ HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH TGGTFDSAATSAANFQTALEELKELVPDLKAELDTLAQSDAIETAYRKAADAAKNRQEYE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGRWRDRARASAEIEALSGDVMARGRKVYSLLRDQGLSHAAAAGITGNAYQESRFDPTA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCC MGDGGTSHGLFQHHGPRMNDLLAFGGRDNAAMQVAFAVQEMRRSGLFGRINSLSDPAEAA CCCCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH RLFMTEFERPHPDHANLAARQGFARVAGGWGDPGMWEMPKIPAPDIDPWENLREVTSGVK HHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DNLSDTTTQAEQLGSIAGTAISGLVSALADGKITAQEFSQILAQIAQQLLQMAFSGMQKG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALAGGNNFLAGLLGGLLGFSGGGKVSGPGTGTSDSIPARLSDGEFVVKASEARKHGALLE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHHHH AINSGRVASFAEGGHVGSTTGLARSIASTNNTTFAPSIAINVEGGSRGPEADKAMAEQIA HHCCCCCEECCCCCCCCCHHHHHHHHHCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHH KETRAAIRKEMAEFAQDQMRAGGLFSQRKTH HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure ATEEERLIVSLEARMNQFEKNFAKANRTANDNFAKIERRAKESGDRLETYLGKSTANIA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHH NNFAALASKATIGVTVMAGIVTAFRQVAGSIAEVDREARKAGVTAKTWQQWQYVATATGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SVDGVTDALKELNIRGDEFAKTGNGSAKAAFEALGYTAEEVAKKLKDPSRFLDEIIGKLQ CHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH TLDAAARTRILDDMFGGTGAEEMAKVLGASVAEIQRMRTEAATFTDEQIEAAKKIDAEFN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KIWRNFTVYAKKAAIESVGILGQIKSFLGGEWLPGYDQMEENRRYYGSDEFRLKRLQDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH ANLLRQIEDTESFPDSQAKDFNLQSFRRQLEEVDAEIANLTGTGEGLDQSLDQLGDTTQQ HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH TGGTFDSAATSAANFQTALEELKELVPDLKAELDTLAQSDAIETAYRKAADAAKNRQEYE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGRWRDRARASAEIEALSGDVMARGRKVYSLLRDQGLSHAAAAGITGNAYQESRFDPTA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCC MGDGGTSHGLFQHHGPRMNDLLAFGGRDNAAMQVAFAVQEMRRSGLFGRINSLSDPAEAA CCCCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH RLFMTEFERPHPDHANLAARQGFARVAGGWGDPGMWEMPKIPAPDIDPWENLREVTSGVK HHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DNLSDTTTQAEQLGSIAGTAISGLVSALADGKITAQEFSQILAQIAQQLLQMAFSGMQKG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALAGGNNFLAGLLGGLLGFSGGGKVSGPGTGTSDSIPARLSDGEFVVKASEARKHGALLE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHHHH AINSGRVASFAEGGHVGSTTGLARSIASTNNTTFAPSIAINVEGGSRGPEADKAMAEQIA HHCCCCCEECCCCCCCCCHHHHHHHHHCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHH KETRAAIRKEMAEFAQDQMRAGGLFSQRKTH HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA