| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634199
Identifier: 110634199
GI number: 110634199
Start: 1986010
End: 1987095
Strand: Reverse
Name: 110634199
Synonym: Meso_1849
Alternate gene names: NA
Gene position: 1987095-1986010 (Counterclockwise)
Preceding gene: 110634200
Following gene: 110634198
Centisome position: 45.03
GC content: 65.47
Gene sequence:
>1086_bases ATGACATCATTCCAGGTGATGCCGCAGGACATGGAAGCGATCGCGACGGGCGGTGCGTTTCTCGGCACGGGCGGCGGTGG AGACCCGTATATCGGCAAGCTGATGGCGCAGTCCGTGATGGCGGAGAAGGGGCCGGTGACGGTGATTTCGCCCGACGACG TCGAGGACGACTGGCTTTGCCTGCCAGTGTGCATGATGGGCGCGCCGACCGTAATGGTGGAGAAGCTACCCAACGGATCG GAGGCCGGTTTCGCCCTGGCGCAGCTCGAGGCCTTTCTCGGGCGCAGGGCCGACGCGCTGATCTGCATCGAGGCCGGCGG GCTCAACTCGACAATTCCCTTCGCCGTCGCCTCCGCCACCGGCCTGCCGCTGATCGACGGCGACGGGATGGGCCGGGCCT TTCCGGAACTGCAAATGGTGTCCTTCACCATGCACGGCGTCTCGGCAACGCCCATGGTGCTGGCCGACGACAAGGGCAAC AGCTCCATCATCAACGCGATCTCCAACCGCTGGACGGAGCGTCTCGCCCGATGCCAGACCGTGGAAATGGGGGGAGCGGC CCTGGTGGCGCTCTACCCGATGAGCGGGGCAGAGGTGAAGCGCGGCATCCTTCGCCACACCCTGTCGCTTATCAAGGAGA TCGGCGAGACGATATCGGCGGAGCGGAATGCACACCGCAATCCCGCAGAGGCGCTGATCAGGCGTCTTGGCGGCAAGCGC CTGTTTTCCGGCCGGGTCGCCGATATAGACCGGCGGACCGTAGGCGGATTTGCGCGCGGGCAGGCGCTATTCAAGGGAAT GGAAGCGGACGAGGGGAAGAGCTTCCGCGTCGATTTCCAGAACGAATTCCTGATTTGCCGAGGCGACGATGGCGCCCCGA TGGCGATAACGCCCGACCTGATCTGTGCGCTCGACGCCGACGGAGGCCTTCCGGTGACCACGGAGCAGCTCCGCTACGGC CTGGCCGTGACGATGATCGGCCTGCCCTGCGACGAGCAGTGGCGGACGCCGGCCGGGCTCGATCTCGTGGGTCCCGCCTA TTTCGGCTACGATCACGAATACGCGCCGTTACACAGCCTGTCCTGA
Upstream 100 bases:
>100_bases GCTCCGACGCGGCGCTGGAGGTGGTCGGACCCAAGGGATTCGGCCTTGAAGGGATCGATTACAGGCCAATGTGCGAGCAG GAACGGGAGAGGGTGGCTCG
Downstream 100 bases:
>100_bases TGTCCGAGGCGCCGGATCGGCGCCGACAACGTGCTTGATCCGCCCGATCATAATGGCGGCCTGACAATGATCTTCCTGGC TGTGAACGCCACCTCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTSFQVMPQDMEAIATGGAFLGTGGGGDPYIGKLMAQSVMAEKGPVTVISPDDVEDDWLCLPVCMMGAPTVMVEKLPNGS EAGFALAQLEAFLGRRADALICIEAGGLNSTIPFAVASATGLPLIDGDGMGRAFPELQMVSFTMHGVSATPMVLADDKGN SSIINAISNRWTERLARCQTVEMGGAALVALYPMSGAEVKRGILRHTLSLIKEIGETISAERNAHRNPAEALIRRLGGKR LFSGRVADIDRRTVGGFARGQALFKGMEADEGKSFRVDFQNEFLICRGDDGAPMAITPDLICALDADGGLPVTTEQLRYG LAVTMIGLPCDEQWRTPAGLDLVGPAYFGYDHEYAPLHSLS
Sequences:
>Translated_361_residues MTSFQVMPQDMEAIATGGAFLGTGGGGDPYIGKLMAQSVMAEKGPVTVISPDDVEDDWLCLPVCMMGAPTVMVEKLPNGS EAGFALAQLEAFLGRRADALICIEAGGLNSTIPFAVASATGLPLIDGDGMGRAFPELQMVSFTMHGVSATPMVLADDKGN SSIINAISNRWTERLARCQTVEMGGAALVALYPMSGAEVKRGILRHTLSLIKEIGETISAERNAHRNPAEALIRRLGGKR LFSGRVADIDRRTVGGFARGQALFKGMEADEGKSFRVDFQNEFLICRGDDGAPMAITPDLICALDADGGLPVTTEQLRYG LAVTMIGLPCDEQWRTPAGLDLVGPAYFGYDHEYAPLHSLS >Mature_360_residues TSFQVMPQDMEAIATGGAFLGTGGGGDPYIGKLMAQSVMAEKGPVTVISPDDVEDDWLCLPVCMMGAPTVMVEKLPNGSE AGFALAQLEAFLGRRADALICIEAGGLNSTIPFAVASATGLPLIDGDGMGRAFPELQMVSFTMHGVSATPMVLADDKGNS SIINAISNRWTERLARCQTVEMGGAALVALYPMSGAEVKRGILRHTLSLIKEIGETISAERNAHRNPAEALIRRLGGKRL FSGRVADIDRRTVGGFARGQALFKGMEADEGKSFRVDFQNEFLICRGDDGAPMAITPDLICALDADGGLPVTTEQLRYGL AVTMIGLPCDEQWRTPAGLDLVGPAYFGYDHEYAPLHSLS
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38345; Mature: 38213
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFQVMPQDMEAIATGGAFLGTGGGGDPYIGKLMAQSVMAEKGPVTVISPDDVEDDWLC CCCCCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEH LPVCMMGAPTVMVEKLPNGSEAGFALAQLEAFLGRRADALICIEAGGLNSTIPFAVASAT HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCC GLPLIDGDGMGRAFPELQMVSFTMHGVSATPMVLADDKGNSSIINAISNRWTERLARCQT CCEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEE VEMGGAALVALYPMSGAEVKRGILRHTLSLIKEIGETISAERNAHRNPAEALIRRLGGKR EECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE LFSGRVADIDRRTVGGFARGQALFKGMEADEGKSFRVDFQNEFLICRGDDGAPMAITPDL EECCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCE ICALDADGGLPVTTEQLRYGLAVTMIGLPCDEQWRTPAGLDLVGPAYFGYDHEYAPLHSL EEEEECCCCCCCCHHHHHHCEEEEEEECCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCC S C >Mature Secondary Structure TSFQVMPQDMEAIATGGAFLGTGGGGDPYIGKLMAQSVMAEKGPVTVISPDDVEDDWLC CCCCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEH LPVCMMGAPTVMVEKLPNGSEAGFALAQLEAFLGRRADALICIEAGGLNSTIPFAVASAT HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCC GLPLIDGDGMGRAFPELQMVSFTMHGVSATPMVLADDKGNSSIINAISNRWTERLARCQT CCEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEE VEMGGAALVALYPMSGAEVKRGILRHTLSLIKEIGETISAERNAHRNPAEALIRRLGGKR EECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE LFSGRVADIDRRTVGGFARGQALFKGMEADEGKSFRVDFQNEFLICRGDDGAPMAITPDL EECCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCE ICALDADGGLPVTTEQLRYGLAVTMIGLPCDEQWRTPAGLDLVGPAYFGYDHEYAPLHSL EEEEECCCCCCCCHHHHHHCEEEEEEECCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA