Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

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The map label for this gene is 110634196

Identifier: 110634196

GI number: 110634196

Start: 1982612

End: 1983577

Strand: Reverse

Name: 110634196

Synonym: Meso_1846

Alternate gene names: NA

Gene position: 1983577-1982612 (Counterclockwise)

Preceding gene: 110634197

Following gene: 110634195

Centisome position: 44.95

GC content: 62.63

Gene sequence:

>966_bases
ATGAACACATCCATTCTCAACCGGCTGCGGCGCTGCTTTTCGCTGTTGTTCATATCGGCGCTGGCCGGCCTTTCCGTGTT
GCCGGCCCAAGCGGCCTGGCCGGAGCGCGCGATCGAAATCATCGTCGCCTACGCTCCGGGCGGCGGGTCGGACGCGATCG
CGCGCATCGCCGCGCGCATCATGTCGCGCGAACTGGGCGTGCCGGTGAACGTCGTCAACATGCCGGGCGGCAACCAGCTG
CCGGGGATCGAGGCGGTGATGCGGGCAGCGCCCGACGGCTATACTCTTCTTCTGGAAACACCCGCGACGAGCTCGATCAA
GGCGACCATACCCGACAACCCGGTCGATCTGCAGGCGCGCACCTATGGCCCTCTCATGGCCGCCCAGGGCGCGCTCATCA
TGGTCAAGGGCGATTCCCCCTGGAACAGCGTCAGCGACATGGTCGACTTCATCAAGAACAATCCCGGAAGCTTCACTTAT
GTCCGGCTTGGTGGATCCACCTATTCCGATCTCGTAACCCAAGGACTTTTCTCCGTGGCGGGCATCGATCCCCAGACGGT
GAAGCCGGTCGACTACAGTGGGAATGGTCCCGGCAACATTGCGGTCGCGGGCGGTCACGTGATGATGTCCGGCGGCTCGA
TCAATCCGCTGATCTCATCGGGCGATCTCAAGGTGCTGGCGATCGCCGGTCCTGAAAGAGCCACCGCGCTTCCCGATGTT
CCGACCCTCGCCGAGTCGGGCTATCCGGTCGATTTCGTCGCTTATTTCGGATTCTCGGGACCGGTCGGTCTGCCTGAAGA
GGTGCTGAACCGGCTCGATGAGGTCGTCCAGAAGATGAGCGGGGACGACAGTTTCCGCAAGGAGATCGAAGCGATCGGCT
TCTATCCGCGTTTCCTGCCGGCGAAAGAGGCGCGCACCTATATCCTCGATGAGGCGGAGGAATATCGCGCGCTGGCGAAG
CGATGA

Upstream 100 bases:

>100_bases
TGCGCGTCTACAGCGCAGTGTGGAAGGACTAGAGGGGAAGGCAGGGTGAACCTGACCGTCACAAAAACCGACAAGGGGAA
TTCGTGAGGAGAACAATGCG

Downstream 100 bases:

>100_bases
ACGAGTCAGGAGGGCAGGCGGATCGCTGCGGCCGCCCCCCTGCATCCGTCGATCCCAACTTGCGGAGCAACCGCGATGTC
CGATGAGCAGACCGTGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL
PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY
VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV
PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK
R

Sequences:

>Translated_321_residues
MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL
PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY
VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV
PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK
R
>Mature_321_residues
MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARIMSRELGVPVNVVNMPGGNQL
PGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQARTYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTY
VRLGGSTYSDLVTQGLFSVAGIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV
PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLPAKEARTYILDEAEEYRALAK
R

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34020; Mature: 34020

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
MSRELGVPVNVVNMPGGNQLPGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQAR
HHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEC
TYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTYVRLGGSTYSDLVTQGLFSVA
CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHC
GIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV
CCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCC
PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLP
CHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
AKEARTYILDEAEEYRALAKR
HHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MNTSILNRLRRCFSLLFISALAGLSVLPAQAAWPERAIEIIVAYAPGGGSDAIARIAARI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
MSRELGVPVNVVNMPGGNQLPGIEAVMRAAPDGYTLLLETPATSSIKATIPDNPVDLQAR
HHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEC
TYGPLMAAQGALIMVKGDSPWNSVSDMVDFIKNNPGSFTYVRLGGSTYSDLVTQGLFSVA
CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHC
GIDPQTVKPVDYSGNGPGNIAVAGGHVMMSGGSINPLISSGDLKVLAIAGPERATALPDV
CCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCC
PTLAESGYPVDFVAYFGFSGPVGLPEEVLNRLDEVVQKMSGDDSFRKEIEAIGFYPRFLP
CHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
AKEARTYILDEAEEYRALAKR
HHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]