| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634197
Identifier: 110634197
GI number: 110634197
Start: 1983646
End: 1984719
Strand: Reverse
Name: 110634197
Synonym: Meso_1847
Alternate gene names: NA
Gene position: 1984719-1983646 (Counterclockwise)
Preceding gene: 110634198
Following gene: 110634196
Centisome position: 44.98
GC content: 58.94
Gene sequence:
>1074_bases ATGTCGTACTACGAATTGTCCGCCGATGAGGATTTGAACATCCTTAGACTGCATGAAAAGGCGATTGTGTTCGACGGTGC CTTCCCGATGCTCGGCTTCTACAAGGCGCCTGAGGAGGAAATCGACGCTTTCCTTAAGGGCGGCGTGACGGGCGGGAACG CGACGCTCTCTTCCGACGAGACCGATTTCTCCGGCGCGATCGCGAATTTCCGCAACCTGAAGGCTCTCATTTCGCGCAAT AGCGATCGGATGGCCCTTTGCACCCGTGCGGCCGATATCGAGCGTTGCAAGCGGGACGGCAAGATTGGCATGGTTCCCTT CTTCCAGAATCCCAAGCCGATTGCCGACCGGCTGGCCGATCTGGAGATTTTCTACGAGCTGGGCCTGCGCGTATTCCAGA TGACATACAACAATCTGGGCTTCATCGGCGCCGGCTGTTGCGAGCGCAACGATCCGGGGCTGAGCAATTTCGGCATCGAG GTGGTGAGCAAATGCAACGAGCTCGGCATTCTGCTAGACATCTCCCATTGCGGGCCGGCGACATCCTGGGACACGCTGAA GTTTTCCAAGGCGCCCGTGGTCGCCAGCCATTCGGGTGCATATGCCCTTGCGCGCGCCTTCGGGCGCAATAAGCCCGACG ACATGTTAAAGGCGGTGGCTGACACGGGTGGACTGGCAGGCATTCCCTTCTTCCCCTGCCTCGTGAAGAGAGATCCGGAG ACGCATGTCGTGCAGCCCTCCACCGTCGAGGACGTCATCGACCATATCGACCACGCCGTCGAGATCATGGGCATAGACCA TGTTGGAATTGCTTCCGACATGTCCTCCCATCTGGCGCGTACCCTGGAGCTTACGCGAGACTCGGTGCTGCGCACCACGC GACTGCGTCATCCGGAGGTTTTCGGCGTCGGGCCTACCGATCGCTACGATCCTTATCCGGCAGGTTTAGACAGCCATGCC AAAATGCTGAACCTCAGCCGCGGGCTCCACAAACGCGGCTATGCCGAAGGCGATATCATAAAGATACTCGGGGGGAACTG GATGCGCGTCTACAGCGCAGTGTGGAAGGACTAG
Upstream 100 bases:
>100_bases ACCCCGTGCCTCAATGCATTGGCGAAATGCTCCAGCTTGGAGTGAACTCCAATATGGGTTCCGGTCGGAATTCGAGATGC AGCAGCCGCAAGAGGGAGTG
Downstream 100 bases:
>100_bases AGGGGAAGGCAGGGTGAACCTGACCGTCACAAAAACCGACAAGGGGAATTCGTGAGGAGAACAATGCGATGAACACATCC ATTCTCAACCGGCTGCGGCG
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSYYELSADEDLNILRLHEKAIVFDGAFPMLGFYKAPEEEIDAFLKGGVTGGNATLSSDETDFSGAIANFRNLKALISRN SDRMALCTRAADIERCKRDGKIGMVPFFQNPKPIADRLADLEIFYELGLRVFQMTYNNLGFIGAGCCERNDPGLSNFGIE VVSKCNELGILLDISHCGPATSWDTLKFSKAPVVASHSGAYALARAFGRNKPDDMLKAVADTGGLAGIPFFPCLVKRDPE THVVQPSTVEDVIDHIDHAVEIMGIDHVGIASDMSSHLARTLELTRDSVLRTTRLRHPEVFGVGPTDRYDPYPAGLDSHA KMLNLSRGLHKRGYAEGDIIKILGGNWMRVYSAVWKD
Sequences:
>Translated_357_residues MSYYELSADEDLNILRLHEKAIVFDGAFPMLGFYKAPEEEIDAFLKGGVTGGNATLSSDETDFSGAIANFRNLKALISRN SDRMALCTRAADIERCKRDGKIGMVPFFQNPKPIADRLADLEIFYELGLRVFQMTYNNLGFIGAGCCERNDPGLSNFGIE VVSKCNELGILLDISHCGPATSWDTLKFSKAPVVASHSGAYALARAFGRNKPDDMLKAVADTGGLAGIPFFPCLVKRDPE THVVQPSTVEDVIDHIDHAVEIMGIDHVGIASDMSSHLARTLELTRDSVLRTTRLRHPEVFGVGPTDRYDPYPAGLDSHA KMLNLSRGLHKRGYAEGDIIKILGGNWMRVYSAVWKD >Mature_356_residues SYYELSADEDLNILRLHEKAIVFDGAFPMLGFYKAPEEEIDAFLKGGVTGGNATLSSDETDFSGAIANFRNLKALISRNS DRMALCTRAADIERCKRDGKIGMVPFFQNPKPIADRLADLEIFYELGLRVFQMTYNNLGFIGAGCCERNDPGLSNFGIEV VSKCNELGILLDISHCGPATSWDTLKFSKAPVVASHSGAYALARAFGRNKPDDMLKAVADTGGLAGIPFFPCLVKRDPET HVVQPSTVEDVIDHIDHAVEIMGIDHVGIASDMSSHLARTLELTRDSVLRTTRLRHPEVFGVGPTDRYDPYPAGLDSHAK MLNLSRGLHKRGYAEGDIIKILGGNWMRVYSAVWKD
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=273, Percent_Identity=29.3040293040293, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI4758190, Length=273, Percent_Identity=29.3040293040293, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI11641269, Length=247, Percent_Identity=27.5303643724696, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI193211608, Length=245, Percent_Identity=25.3061224489796, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362638, Length=290, Percent_Identity=32.0689655172414, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI281362636, Length=290, Percent_Identity=32.0689655172414, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI221475880, Length=290, Percent_Identity=27.9310344827586, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI161083233, Length=202, Percent_Identity=32.1782178217822, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 39243; Mature: 39112
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYELSADEDLNILRLHEKAIVFDGAFPMLGFYKAPEEEIDAFLKGGVTGGNATLSSDE CCEEECCCCCCCCEEEEECEEEEECCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEECCCC TDFSGAIANFRNLKALISRNSDRMALCTRAADIERCKRDGKIGMVPFFQNPKPIADRLAD CCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LEIFYELGLRVFQMTYNNLGFIGAGCCERNDPGLSNFGIEVVSKCNELGILLDISHCGPA HHHHHHHHHHHEEHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC TSWDTLKFSKAPVVASHSGAYALARAFGRNKPDDMLKAVADTGGLAGIPFFPCLVKRDPE CCCCCEEECCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC THVVQPSTVEDVIDHIDHAVEIMGIDHVGIASDMSSHLARTLELTRDSVLRTTRLRHPEV CCEECCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE FGVGPTDRYDPYPAGLDSHAKMLNLSRGLHKRGYAEGDIIKILGGNWMRVYSAVWKD EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCC >Mature Secondary Structure SYYELSADEDLNILRLHEKAIVFDGAFPMLGFYKAPEEEIDAFLKGGVTGGNATLSSDE CEEECCCCCCCCEEEEECEEEEECCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEECCCC TDFSGAIANFRNLKALISRNSDRMALCTRAADIERCKRDGKIGMVPFFQNPKPIADRLAD CCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LEIFYELGLRVFQMTYNNLGFIGAGCCERNDPGLSNFGIEVVSKCNELGILLDISHCGPA HHHHHHHHHHHEEHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC TSWDTLKFSKAPVVASHSGAYALARAFGRNKPDDMLKAVADTGGLAGIPFFPCLVKRDPE CCCCCEEECCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC THVVQPSTVEDVIDHIDHAVEIMGIDHVGIASDMSSHLARTLELTRDSVLRTTRLRHPEV CCEECCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE FGVGPTDRYDPYPAGLDSHAKMLNLSRGLHKRGYAEGDIIKILGGNWMRVYSAVWKD EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]