Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634192

Identifier: 110634192

GI number: 110634192

Start: 1978416

End: 1979255

Strand: Reverse

Name: 110634192

Synonym: Meso_1842

Alternate gene names: NA

Gene position: 1979255-1978416 (Counterclockwise)

Preceding gene: 110634193

Following gene: 110634189

Centisome position: 44.86

GC content: 62.02

Gene sequence:

>840_bases
ATGCGCATCTTTGATTGCCGCCTTAGACCTCCCTTCGGGGAGTTTCTTACCACCAGCTACTTCACCGACGTGCCGCGGAT
CACGCGGATGGCAGCTGAAATGGGCCTGGAGGCGCCCGCGTCGCTTGCGGAAACCTCAATGGAACTACTGTTCACGGAGA
TGGATGCGGCCGGCGTTGGAGTGGGGCTGGCAGCGGGCCGTATTTCGCCCGGTTTGGGGAACGTGAGCAACGCCAGCGTC
CGTGAGCTTTGCCGGCTGTGGCCGGACAGGTTCGTGGGCCTTGCGGTGGTGGATCCTGGCAAGGCGGCCGAGGCATCGGC
GGAGATTGACCGCGCCATGCGCGACGGCTTCAAAGGCGCACTCATCGAACCGGGATTGCTGGGAAACGCGCTGGCGATCG
ACGACAGGCGCATCTACCCCTTCTATAGCCATTGCGAGGACGCAGGCATCCCGCTTTTCATCATGGCCGGAGGAAATGCG
GGACCGGACCTGAGCTTCACAAATCCCGAGCACCTCGATCGTGTTGCGGCCGATTTCCCGCGTCTCAAGCTGGTGTCGTT
GCATGGCAGCTGGCCATGGGTGCTGCAAATCCTGCATGTGTGCCTGCGCCGGCAAAACGTGTATCTGTGTCCAGACATGT
ATCTGGCCGGCCGCATGCCGGGGTTCGAGGAATATGTCCGCGCTGCAAACGGCTTCCTCAGCGACCGGTTGCTCTTCGGC
AGCTCCTATCCCGTGCTTGCGCTGGACCGAGCCGTCAAGAGCGTGCAGCAAATCGGTTTCCGTCCGGAGGTGCTCGAGCG
CATTTTCTTCCGCAATGCCGCAGCATTGCTGGGGCTGTGA

Upstream 100 bases:

>100_bases
CATCCATCGATATCGCGCCTTTCAGCCAATCGCGCTTCTGAGCCGCCTCGCTTTTTGCGGCGACTGCCACCACCTCCTGA
TAAAGATCGGAACGTCTCGA

Downstream 100 bases:

>100_bases
TGGCATCTTTCCGGTGGCTCAGCGTCCGCCGAGCGCTCCCGTCAATTCCTGCGCGACAGACGACACGAGCGGGCCAACCG
CTTCGATGCGCTCGTCCGTC

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV
RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA
GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG
SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL

Sequences:

>Translated_279_residues
MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV
RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA
GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG
SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL
>Mature_279_residues
MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVGVGLAAGRISPGLGNVSNASV
RELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGALIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNA
GPDLSFTNPEHLDRVAADFPRLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG
SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30626; Mature: 30626

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVG
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
VGLAAGRISPGLGNVSNASVRELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGA
CHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC
LIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNAGPDLSFTNPEHLDRVAADFP
CCCCCCCCCEEEECCCEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC
RLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG
CEEEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC
SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIFDCRLRPPFGEFLTTSYFTDVPRITRMAAEMGLEAPASLAETSMELLFTEMDAAGVG
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
VGLAAGRISPGLGNVSNASVRELCRLWPDRFVGLAVVDPGKAAEASAEIDRAMRDGFKGA
CHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC
LIEPGLLGNALAIDDRRIYPFYSHCEDAGIPLFIMAGGNAGPDLSFTNPEHLDRVAADFP
CCCCCCCCCEEEECCCEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC
RLKLVSLHGSWPWVLQILHVCLRRQNVYLCPDMYLAGRMPGFEEYVRAANGFLSDRLLFG
CEEEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC
SSYPVLALDRAVKSVQQIGFRPEVLERIFFRNAAALLGL
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA