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The map label for this gene is dadA [H]

Identifier: 110634193

GI number: 110634193

Start: 1979315

End: 1980577

Strand: Reverse

Name: dadA [H]

Synonym: Meso_1843

Alternate gene names: 110634193

Gene position: 1980577-1979315 (Counterclockwise)

Preceding gene: 110634194

Following gene: 110634192

Centisome position: 44.89

GC content: 64.92

Gene sequence:

>1263_bases
ATGCAAAATGGGAAAAAACAGAACGTAGCTGTCGTGGGAGCGGGCATTGTGGGCGTATGCAGCGCCCTCTGGCTGCAAAG
GGAAGGCTACGACGTCACGCTCATCGATCCCAATCCGCCGGGCAGCGGCGCTTCCTACGGGAATGCCGGCGCCTTCAGCC
CTGCCTCCGTGGTGCCCATGGCAATGCCCGGCGTGCTGCGCCATGTGCCGGGCTATCTGCTCAATCCCCATGGTCCCCTC
GCGATCCACTGGGGATATCTGCCGAAGCTGGCGCCCTGGCTCCTGCGCTTCATCCGTTCCGGCCGGCGCGAGCGGGTGGA
CAAGCAGGCAGCGGCACTGGCGGGCCTCCTCGGTCCCGTTTTCGACTGTCTGATGCCGTTGGCGAAGCAGGCTGAAGCAA
CGCATCTCATCCGGCGCGACGGCTTTCTCTATGTCTATCGAACCGAGGCCGCGCTCCGCGGCGATGCCTATGGCTGGGAG
CTACGGCGCCGGCACGGGATCGCCTTCGATATCCTCGAAGGCCCTGAAATCAAGGAGTTCGATCCGGCGCTCTCGCCCGA
CTACCACGCCGCGCTTTTCGTGCCCGGGAACGGCCATACCGTCGATCCGCAAGGCCTCGTTCAGCATTTGGCGAGGGCGG
TGGAAAAAGCCGGCGGGCGGCATTTCAAGGCGAGCGCGGAGGATTTCAAGCGTGACGGATCGGCTGTTAGGGCGGTGTTG
ACCGATAGGGGCGAGGTGGCCTGCGATTTCGCCGTGATCGCCGCCGGCGCCCGGTCCGCGCGGCTTGCCGCCCGGTTGGG
CGAGAAGATCCCGCTCGACACCGAACGGGGGTATCACCTGATGCTCAAGTCGCCGGAGGCGATGCCCAGGGTGCCCGTCC
TCGAGGCCATGCATAAATTCGTTGCAACGCCGATGCAGGCCGGGCTGCGGATAGCGGGAACCGTCGAGTTCGCGGGCCTC
GATAGACCGCCCAACATGGATCGTGCGCGCCGCCTGCTGCGTCCTGCAAGGGCGCTGTTTCCCGCCTTGCGCGAGGACTA
CCCGGAATCGGAAATGTCCAAGTGGATGGGATTCCGCCCCAGCCTGCCGGATTCTCTTCCGGTGATTGGCCGGTCGAAAG
CTTCGCCGGGCATCGTCTACGCCTTCGGACATGGGCATGTGGGCATGTGCGGCGGACCGATGACGGGCAAACTGGTCGCG
GAAATGATCGCCGGCCGCCCGACATCCATCGATATCGCGCCTTTCAGCCAATCGCGCTTCTGA

Upstream 100 bases:

>100_bases
TTTGGAGCGGCCGCTCTTCTGGATGTTCATCGTCCTTGCGGCGCTCTCGCTCTGGTTCAGCCGCCGCCTCTGGCGCGCTA
TCGAATAAGGTCGGACGGAA

Downstream 100 bases:

>100_bases
GCCGCCTCGCTTTTTGCGGCGACTGCCACCACCTCCTGATAAAGATCGGAACGTCTCGAATGCGCATCTTTGATTGCCGC
CTTAGACCTCCCTTCGGGGA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MQNGKKQNVAVVGAGIVGVCSALWLQREGYDVTLIDPNPPGSGASYGNAGAFSPASVVPMAMPGVLRHVPGYLLNPHGPL
AIHWGYLPKLAPWLLRFIRSGRRERVDKQAAALAGLLGPVFDCLMPLAKQAEATHLIRRDGFLYVYRTEAALRGDAYGWE
LRRRHGIAFDILEGPEIKEFDPALSPDYHAALFVPGNGHTVDPQGLVQHLARAVEKAGGRHFKASAEDFKRDGSAVRAVL
TDRGEVACDFAVIAAGARSARLAARLGEKIPLDTERGYHLMLKSPEAMPRVPVLEAMHKFVATPMQAGLRIAGTVEFAGL
DRPPNMDRARRLLRPARALFPALREDYPESEMSKWMGFRPSLPDSLPVIGRSKASPGIVYAFGHGHVGMCGGPMTGKLVA
EMIAGRPTSIDIAPFSQSRF

Sequences:

>Translated_420_residues
MQNGKKQNVAVVGAGIVGVCSALWLQREGYDVTLIDPNPPGSGASYGNAGAFSPASVVPMAMPGVLRHVPGYLLNPHGPL
AIHWGYLPKLAPWLLRFIRSGRRERVDKQAAALAGLLGPVFDCLMPLAKQAEATHLIRRDGFLYVYRTEAALRGDAYGWE
LRRRHGIAFDILEGPEIKEFDPALSPDYHAALFVPGNGHTVDPQGLVQHLARAVEKAGGRHFKASAEDFKRDGSAVRAVL
TDRGEVACDFAVIAAGARSARLAARLGEKIPLDTERGYHLMLKSPEAMPRVPVLEAMHKFVATPMQAGLRIAGTVEFAGL
DRPPNMDRARRLLRPARALFPALREDYPESEMSKWMGFRPSLPDSLPVIGRSKASPGIVYAFGHGHVGMCGGPMTGKLVA
EMIAGRPTSIDIAPFSQSRF
>Mature_420_residues
MQNGKKQNVAVVGAGIVGVCSALWLQREGYDVTLIDPNPPGSGASYGNAGAFSPASVVPMAMPGVLRHVPGYLLNPHGPL
AIHWGYLPKLAPWLLRFIRSGRRERVDKQAAALAGLLGPVFDCLMPLAKQAEATHLIRRDGFLYVYRTEAALRGDAYGWE
LRRRHGIAFDILEGPEIKEFDPALSPDYHAALFVPGNGHTVDPQGLVQHLARAVEKAGGRHFKASAEDFKRDGSAVRAVL
TDRGEVACDFAVIAAGARSARLAARLGEKIPLDTERGYHLMLKSPEAMPRVPVLEAMHKFVATPMQAGLRIAGTVEFAGL
DRPPNMDRARRLLRPARALFPALREDYPESEMSKWMGFRPSLPDSLPVIGRSKASPGIVYAFGHGHVGMCGGPMTGKLVA
EMIAGRPTSIDIAPFSQSRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=424, Percent_Identity=27.122641509434, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076
- InterPro:   IPR006036 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45485; Mature: 45485

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNGKKQNVAVVGAGIVGVCSALWLQREGYDVTLIDPNPPGSGASYGNAGAFSPASVVPM
CCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AMPGVLRHVPGYLLNPHGPLAIHWGYLPKLAPWLLRFIRSGRRERVDKQAAALAGLLGPV
HHHHHHHHCCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FDCLMPLAKQAEATHLIRRDGFLYVYRTEAALRGDAYGWELRRRHGIAFDILEGPEIKEF
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCHHHHHHCCCEEEECCCCCCCCC
DPALSPDYHAALFVPGNGHTVDPQGLVQHLARAVEKAGGRHFKASAEDFKRDGSAVRAVL
CCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCHHHHHHH
TDRGEVACDFAVIAAGARSARLAARLGEKIPLDTERGYHLMLKSPEAMPRVPVLEAMHKF
HCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
VATPMQAGLRIAGTVEFAGLDRPPNMDRARRLLRPARALFPALREDYPESEMSKWMGFRP
HHCHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SLPDSLPVIGRSKASPGIVYAFGHGHVGMCGGPMTGKLVAEMIAGRPTSIDIAPFSQSRF
CCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MQNGKKQNVAVVGAGIVGVCSALWLQREGYDVTLIDPNPPGSGASYGNAGAFSPASVVPM
CCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AMPGVLRHVPGYLLNPHGPLAIHWGYLPKLAPWLLRFIRSGRRERVDKQAAALAGLLGPV
HHHHHHHHCCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FDCLMPLAKQAEATHLIRRDGFLYVYRTEAALRGDAYGWELRRRHGIAFDILEGPEIKEF
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCHHHHHHCCCEEEECCCCCCCCC
DPALSPDYHAALFVPGNGHTVDPQGLVQHLARAVEKAGGRHFKASAEDFKRDGSAVRAVL
CCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCHHHHHHH
TDRGEVACDFAVIAAGARSARLAARLGEKIPLDTERGYHLMLKSPEAMPRVPVLEAMHKF
HCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
VATPMQAGLRIAGTVEFAGLDRPPNMDRARRLLRPARALFPALREDYPESEMSKWMGFRP
HHCHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SLPDSLPVIGRSKASPGIVYAFGHGHVGMCGGPMTGKLVAEMIAGRPTSIDIAPFSQSRF
CCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]