| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634162
Identifier: 110634162
GI number: 110634162
Start: 1940330
End: 1941400
Strand: Direct
Name: 110634162
Synonym: Meso_1811
Alternate gene names: NA
Gene position: 1940330-1941400 (Clockwise)
Preceding gene: 110634150
Following gene: 110634166
Centisome position: 43.97
GC content: 60.13
Gene sequence:
>1071_bases ATGAAAAAGATTCTCTCCGCCCACCTGCTCCTGGTTCTTTCGCTTTCCACTGTTGCGCCTGCGGCGGCGCAATCTGGTGC TTCATCCGAAACGCAACGGCTCCAGCAGTCGCTGGCGGAGATCGTTGAGCGTGCGGAAGCACTGGAACCGCTTGAAACAT TGATCGTCGCCCGGAGGGGCGAAATCATCGTCGAGGAAGCTTTTCGCGGCAACGCCACGGATGAGCCCACCAACATAAAG TCGGCATCCAAGTCGATCATCTCGGCGATGGTCGGGATAGCCGTCGACAAGGGGATTCTGGAAGGCCCCGACCAGAAGAT CGCGCCACTGCTGCGGGATAAACTGCCAGAAGATCCCGATGCCCGCATGAACGATATCACGATCGGCAACCTGCTCTCCA TGCAGGCCGGCCTCAGCCGTACCTCTGGCGCCAATTACGGCCGCTGGGTGGCAAGCGGCGACTGGGTGCGTGCCGCGCTT GCGGAACCCTTCGTCGCCGATCCGGGCGCCGGGATGCTCTATTCCACCGGCAACACACATCTCCTTTCGGCCATCCTCAC GCGGGAGAGCGGGCGATCCACGCTTGCCCTGGCCAGGGAATGGTTTGAACCGTTGGAAGACTTTGCCATCGCCGGCTGGC ACCGTGATCCGCAGGGCATCTATATGGGCGGAAACCAAATGGCTATGACGCCCAGATCGATGCTCGCATTCGGCGAGCTC TACCGCAACGGCGGCAAGGTGGGAGACCAGCAAGTACTCTCGAAAGAATGGATCGAGAAATCATGGCAGCCGCGCACGCG GTCTGTCTTTCATGACGGTCAATATGGCTATGGCTGGTTTATTGAAGACATGGCCGGCCACCGGGTGAACTATGCCTGGG GCTATGGCGGGCAAATGATCTATGTGGTGCCTGATCTCGATCTGACAGCGGTCATGACCTCGGCGGAAGATCAGCCCTCG GCGCGCAACGGCCATCGGGACGACCTTCATGACGTGATGGCCGAGATTATTAGGACCGTCGACACCGAAACGCGCCAGGC GACGGACCAAACGAACAAGCCGCCGGGGTGA
Upstream 100 bases:
>100_bases TGACAAGGCACGGCTGAGACCAGATTGCTGACCGCTCCGGCCGGCGGGATTGTTTCCGTCCTGCCTTGGGATTGCCAACA GCGCCATTATCTTAGTCTCC
Downstream 100 bases:
>100_bases TCCGCGGCGGCCTGCGATTTCCCTGACTTTTCAGCCTATTTCGAAACGAAGCACGAACCGCCGGCCGACTTGAGTTGTGT GCAGAGCTGGATTGCGTCTT
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C-Like Protein; Hydrolase Transmembrane Protein; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKKILSAHLLLVLSLSTVAPAAAQSGASSETQRLQQSLAEIVERAEALEPLETLIVARRGEIIVEEAFRGNATDEPTNIK SASKSIISAMVGIAVDKGILEGPDQKIAPLLRDKLPEDPDARMNDITIGNLLSMQAGLSRTSGANYGRWVASGDWVRAAL AEPFVADPGAGMLYSTGNTHLLSAILTRESGRSTLALAREWFEPLEDFAIAGWHRDPQGIYMGGNQMAMTPRSMLAFGEL YRNGGKVGDQQVLSKEWIEKSWQPRTRSVFHDGQYGYGWFIEDMAGHRVNYAWGYGGQMIYVVPDLDLTAVMTSAEDQPS ARNGHRDDLHDVMAEIIRTVDTETRQATDQTNKPPG
Sequences:
>Translated_356_residues MKKILSAHLLLVLSLSTVAPAAAQSGASSETQRLQQSLAEIVERAEALEPLETLIVARRGEIIVEEAFRGNATDEPTNIK SASKSIISAMVGIAVDKGILEGPDQKIAPLLRDKLPEDPDARMNDITIGNLLSMQAGLSRTSGANYGRWVASGDWVRAAL AEPFVADPGAGMLYSTGNTHLLSAILTRESGRSTLALAREWFEPLEDFAIAGWHRDPQGIYMGGNQMAMTPRSMLAFGEL YRNGGKVGDQQVLSKEWIEKSWQPRTRSVFHDGQYGYGWFIEDMAGHRVNYAWGYGGQMIYVVPDLDLTAVMTSAEDQPS ARNGHRDDLHDVMAEIIRTVDTETRQATDQTNKPPG >Mature_356_residues MKKILSAHLLLVLSLSTVAPAAAQSGASSETQRLQQSLAEIVERAEALEPLETLIVARRGEIIVEEAFRGNATDEPTNIK SASKSIISAMVGIAVDKGILEGPDQKIAPLLRDKLPEDPDARMNDITIGNLLSMQAGLSRTSGANYGRWVASGDWVRAAL AEPFVADPGAGMLYSTGNTHLLSAILTRESGRSTLALAREWFEPLEDFAIAGWHRDPQGIYMGGNQMAMTPRSMLAFGEL YRNGGKVGDQQVLSKEWIEKSWQPRTRSVFHDGQYGYGWFIEDMAGHRVNYAWGYGGQMIYVVPDLDLTAVMTSAEDQPS ARNGHRDDLHDVMAEIIRTVDTETRQATDQTNKPPG
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38939; Mature: 38939
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILSAHLLLVLSLSTVAPAAAQSGASSETQRLQQSLAEIVERAEALEPLETLIVARRG CCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EIIVEEAFRGNATDEPTNIKSASKSIISAMVGIAVDKGILEGPDQKIAPLLRDKLPEDPD CEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCC ARMNDITIGNLLSMQAGLSRTSGANYGRWVASGDWVRAALAEPFVADPGAGMLYSTGNTH CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHH LLSAILTRESGRSTLALAREWFEPLEDFAIAGWHRDPQGIYMGGNQMAMTPRSMLAFGEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEECCHHHHHHHHHH YRNGGKVGDQQVLSKEWIEKSWQPRTRSVFHDGQYGYGWFIEDMAGHRVNYAWGYGGQMI HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHCCCEEEEEECCCCEEE YVVPDLDLTAVMTSAEDQPSARNGHRDDLHDVMAEIIRTVDTETRQATDQTNKPPG EEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC >Mature Secondary Structure MKKILSAHLLLVLSLSTVAPAAAQSGASSETQRLQQSLAEIVERAEALEPLETLIVARRG CCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EIIVEEAFRGNATDEPTNIKSASKSIISAMVGIAVDKGILEGPDQKIAPLLRDKLPEDPD CEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCC ARMNDITIGNLLSMQAGLSRTSGANYGRWVASGDWVRAALAEPFVADPGAGMLYSTGNTH CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHH LLSAILTRESGRSTLALAREWFEPLEDFAIAGWHRDPQGIYMGGNQMAMTPRSMLAFGEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEECCHHHHHHHHHH YRNGGKVGDQQVLSKEWIEKSWQPRTRSVFHDGQYGYGWFIEDMAGHRVNYAWGYGGQMI HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHCCCEEEEEECCCCEEE YVVPDLDLTAVMTSAEDQPSARNGHRDDLHDVMAEIIRTVDTETRQATDQTNKPPG EEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA