| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yjgQ [C]
Identifier: 110634109
GI number: 110634109
Start: 1878665
End: 1879744
Strand: Direct
Name: yjgQ [C]
Synonym: Meso_1758
Alternate gene names: 110634109
Gene position: 1878665-1879744 (Clockwise)
Preceding gene: 110634108
Following gene: 110634110
Centisome position: 42.58
GC content: 60.28
Gene sequence:
>1080_bases ATGATCGGCCCCACTCTCGGCAGATATTTTTTCCGTCGCTATGCCGTGATCACGGCATGGAATTTCATTGGCGTCGCAGC CCTCGTCTATATCGTGACCTTCACGGAGATTACCGGCCGCGCGGGAGATCTTGAGGGCTTCACCACAAGCTGGGCGCTGG GCCTGGCCGCGCTGCAGCTTCCCATCATCATGCAGCAGGCAGTGCCTTTTATCGGCCTTGTTGCCGCAATCGCGACGCTT ATCAGCCTCAACCGCAAATACGAGCTTGTGATCGCGCGCGCCGCCGGCATCTCGGCCTGGCAGTTTCTGACCCCGATCGC ATTCGGCGCCTTCGTCTTCGGGCTTCTGACGGTACTGGTGCTGAATCCCATCGCCGCGCGCGCCTTTGCGAGCGCCCAGA TGCTGGAGGCAACGGTGCGCGGCGCGGATACATCCAACAACGCGAAAGAACGCTGGATCAAGCAGCGCACAGATCAAGGA GAGACGATTATCGGCGCCGACGCGGCGCTGGCCGGCGGGACGGAACTCGTGCGGCCGGTGTTCTTCATCATCGGCGATGA TCGAATCGCCGAGCGCCTTGATGCGGCAAGCGCTTTCCTGCGCGATGGCTATTGGGAACTTGTCGACGTGGTGCGGCGGC AAGGCGGCAACGCACCCGAAAAAATAGCAACCGCCCGGGTGCCCACGAATCTGAAGCCGGAATTCGTGGGCCAGGAACTC ACCGATCCCGATGCGGTTTCCATCTTCGCCCTCCCCGGCATGATCGAAACCGCACATTCCTTCGGGTTGCGCGCCAATGC CTTCGCCATGCAGCTCCATTCACTGATCACGCTGCCGCCGCTGCTTGTGGCCATGACGCTGATCGCGGCCACCGTGTCGA TGAGATTTACGAGGATGGGACAGTCCGCAACTGTGATTCTGGGTGGCGTCGTGGCGGGGTTTCTGCTTTATGTGAGTTCC GTATTGGTGAGGGCGTTTGGTGACGCCGGATTCGTGCCGCCTCCTATTGCGGCCTGGACTCCGGTTATGGTGGCAATGTT TTTCGGGGTTACTTTCCTTTTATTCCGAGAGGACGGTTAA
Upstream 100 bases:
>100_bases TGATGGAACTGCCCACGAGCTGGATTGAGCAGCTCGTCTCCATGGGCCAGAAGGTAACCGATACGATGAATCGGCTGCGG CCGGTTGCTGGAAAGCGCGC
Downstream 100 bases:
>100_bases TGGCGGCTGCGGTGAGAAAGAGCCGCGCGGTCGCTCATTTGACGCGTCTGCGCTTCAAGACAGGTGTTGCGGCCGTCGCA CTGCTGGCGTTCGCCGCTGC
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease; YjgP/YjgQ Family Permease; Permease Protein; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP; Transmembrane Protein; Transporter YjgP/YjgQ
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIGPTLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIMQQAVPFIGLVAAIATL ISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPIAARAFASAQMLEATVRGADTSNNAKERWIKQRTDQG ETIIGADAALAGGTELVRPVFFIIGDDRIAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQEL TDPDAVSIFALPGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIAATVSMRFTRMGQSATVILGGVVAGFLLYVSS VLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG
Sequences:
>Translated_359_residues MIGPTLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIMQQAVPFIGLVAAIATL ISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPIAARAFASAQMLEATVRGADTSNNAKERWIKQRTDQG ETIIGADAALAGGTELVRPVFFIIGDDRIAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQEL TDPDAVSIFALPGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIAATVSMRFTRMGQSATVILGGVVAGFLLYVSS VLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG >Mature_359_residues MIGPTLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIMQQAVPFIGLVAAIATL ISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPIAARAFASAQMLEATVRGADTSNNAKERWIKQRTDQG ETIIGADAALAGGTELVRPVFFIIGDDRIAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQEL TDPDAVSIFALPGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIAATVSMRFTRMGQSATVILGGVVAGFLLYVSS VLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38607; Mature: 38607
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPTLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH PIIMQQAVPFIGLVAAIATLISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNPIAARAFASAQMLEATVRGADTSNNAKERWIKQRTDQGETIIGADAALAGGTELVRPV HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHH FFIIGDDRIAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQEL HHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHCCCCC TDPDAVSIFALPGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIAATVSMRFTRMG CCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSATVILGGVVAGFLLYVSSVLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MIGPTLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH PIIMQQAVPFIGLVAAIATLISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNPIAARAFASAQMLEATVRGADTSNNAKERWIKQRTDQGETIIGADAALAGGTELVRPV HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHH FFIIGDDRIAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQEL HHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHCCCCC TDPDAVSIFALPGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIAATVSMRFTRMG CCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSATVILGGVVAGFLLYVSSVLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA