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The map label for this gene is 110634074

Identifier: 110634074

GI number: 110634074

Start: 1845645

End: 1846376

Strand: Reverse

Name: 110634074

Synonym: Meso_1723

Alternate gene names: NA

Gene position: 1846376-1845645 (Counterclockwise)

Preceding gene: 110634078

Following gene: 110634072

Centisome position: 41.84

GC content: 59.7

Gene sequence:

>732_bases
ATGACCGAAACCGCCGCCGAAGAAAAAGCCGAACCCAAGGAAGAACAGCGACGCCGCGAGCCGGTATTCAATCTCGCCGG
CGTTGTGATCGCCATCATTGTTCTTTGCACGGGCATTCATCTGCTACGGGTCTATGTGCTCAGCCCTGGCGCCGACGACC
GGCTACTCTTGCATTTCGCGTTTCTTCCCATTCGCTACAACGGCGATTACCCCATAGATTTCTATGCTCTCGTCAGTCCG
ATAACCTATTCTTTCCTGCATGGCAGTTTCGCGCATCTCGCCGTCAATATGATCGCGCTCGCAGCCTTCGGCTCTCCGCT
GGCGAACAGGATCGGAGCTGTGCGCTTCCTGTTGTTCTGGTTTGCGGCAACGCTGGCGGCTGCCCTTCTTCACCTCCTCT
TCTATCCAAGTGATGCTTCGCCGCTTGTCGGTGCGTCCGGCGCCATCTCCGGGATGTGGGGAGCTGCGGCCCGTTTTGAC
TTCCGGGTGGATCGCACGGCCGAGAAGCCTGGCTTTTTCGGGCCGGTTCTGCCGCTTTCGGCTGTCGTGCGCTCGCGCAT
GGCGCTCGTGTTCATCGGGGCGTGGTTCGTCACCAACATTGCCGTGGGGGTGACTTCGGGCACCAATGGCGAGCCGGAGA
TCGCCTGGATCGCCCATATTGGCGGCTTTCTTTTCGGCCTATTTGCCATCCGCTTCTTCGACAGGCACCCGCCGATGAAG
CACCCTGCCTGA

Upstream 100 bases:

>100_bases
GACAGGGGACTCGGCCGGGGCAGCCGTCCAGCGCAAATGCTGGGCGGCTTCTGTTTTTCCGCTATGTCTGGTAGGCACGC
AGAAACAGCCGATCAGGGAC

Downstream 100 bases:

>100_bases
GGGCGTTCACTTGCAAAGCCGGACTATTGGGAGCAACATCTGTTCATGGGGACGTTACGGGCGGTTGGCTAGGAGGAGAT
CGCATGACGGTCAAAGCCAT

Product: rhomboid-like protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Rhombiod Family Transmembrane Protein; Peptidase Protein; S54 Family Peptidase; Peptidase; Rhomboid Family Membrane Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTETAAEEKAEPKEEQRRREPVFNLAGVVIAIIVLCTGIHLLRVYVLSPGADDRLLLHFAFLPIRYNGDYPIDFYALVSP
ITYSFLHGSFAHLAVNMIALAAFGSPLANRIGAVRFLLFWFAATLAAALLHLLFYPSDASPLVGASGAISGMWGAAARFD
FRVDRTAEKPGFFGPVLPLSAVVRSRMALVFIGAWFVTNIAVGVTSGTNGEPEIAWIAHIGGFLFGLFAIRFFDRHPPMK
HPA

Sequences:

>Translated_243_residues
MTETAAEEKAEPKEEQRRREPVFNLAGVVIAIIVLCTGIHLLRVYVLSPGADDRLLLHFAFLPIRYNGDYPIDFYALVSP
ITYSFLHGSFAHLAVNMIALAAFGSPLANRIGAVRFLLFWFAATLAAALLHLLFYPSDASPLVGASGAISGMWGAAARFD
FRVDRTAEKPGFFGPVLPLSAVVRSRMALVFIGAWFVTNIAVGVTSGTNGEPEIAWIAHIGGFLFGLFAIRFFDRHPPMK
HPA
>Mature_242_residues
TETAAEEKAEPKEEQRRREPVFNLAGVVIAIIVLCTGIHLLRVYVLSPGADDRLLLHFAFLPIRYNGDYPIDFYALVSPI
TYSFLHGSFAHLAVNMIALAAFGSPLANRIGAVRFLLFWFAATLAAALLHLLFYPSDASPLVGASGAISGMWGAAARFDF
RVDRTAEKPGFFGPVLPLSAVVRSRMALVFIGAWFVTNIAVGVTSGTNGEPEIAWIAHIGGFLFGLFAIRFFDRHPPMKH
PA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26504; Mature: 26373

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAAEEKAEPKEEQRRREPVFNLAGVVIAIIVLCTGIHLLRVYVLSPGADDRLLLHFA
CCCCCCHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FLPIRYNGDYPIDFYALVSPITYSFLHGSFAHLAVNMIALAAFGSPLANRIGAVRFLLFW
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FAATLAAALLHLLFYPSDASPLVGASGAISGMWGAAARFDFRVDRTAEKPGFFGPVLPLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHH
AVVRSRMALVFIGAWFVTNIAVGVTSGTNGEPEIAWIAHIGGFLFGLFAIRFFDRHPPMK
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HPA
CCC
>Mature Secondary Structure 
TETAAEEKAEPKEEQRRREPVFNLAGVVIAIIVLCTGIHLLRVYVLSPGADDRLLLHFA
CCCCCHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FLPIRYNGDYPIDFYALVSPITYSFLHGSFAHLAVNMIALAAFGSPLANRIGAVRFLLFW
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FAATLAAALLHLLFYPSDASPLVGASGAISGMWGAAARFDFRVDRTAEKPGFFGPVLPLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHH
AVVRSRMALVFIGAWFVTNIAVGVTSGTNGEPEIAWIAHIGGFLFGLFAIRFFDRHPPMK
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA