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The map label for this gene is yfgC [C]

Identifier: 110634064

GI number: 110634064

Start: 1836677

End: 1838152

Strand: Direct

Name: yfgC [C]

Synonym: Meso_1712

Alternate gene names: 110634064

Gene position: 1836677-1838152 (Clockwise)

Preceding gene: 110634063

Following gene: 110634065

Centisome position: 41.62

GC content: 61.86

Gene sequence:

>1476_bases
TTGAGGAACCTGGCGTTACGAAAGCCTTGCGTGATGCAGTTCGCGCCGCCTTCTCATTGCCATGATAATGACATATCCGT
ACGGACGACGGTAAATTTAACCCGATTTGCTGCTGTGCTCATATTTCGAATACTGACCGTAATCCTGACCGTGGCGTCCA
TGTTTGCAAGCGCGTCGCCGGCCGCGGCGCAGCGCAGTGTACCGATCGTGCGGGACGCCGAGATCGAGGCGTTGATAGCC
GATTACGCCAAGCCAATCCTTCAGGCAGCGGGTCTCAGTCAGTCCGGCATCGAAATCGTGCTGGTCAACGACCATCGTTT
CAACGCTTTCGTGGCCGGAAGGCGCATCTTCATCCATACGGGCGCGCTGCTTACAGCGGAAACGCCCAATGAGATTATCG
GCGTGATCGCTCACGAGGTGGCCCACCTCGCCGGCGGCCATCAACATAGGCTGCGCGAACAGCTCGCGCGCGCCCAAACC
ATGGCGATTGTGGCCACTCTGCTCGGGATCGGCGCCGGGGTGGCGGCAGCGGCAAGCAATCAGGGCGATCTTGCCCAGGC
GGGCATGGGATTGGCCATGGGCGGTTCCGAGGCGGCGCGGCGAAGCCTGCTTGCCTATCAGCGCACGGAAGAGATCACGG
CCGACCGTTCGGCGATCGAGTATCTGGAGCGCACCGGCCAGTCCGGCCGCGGCATGCTCATCACCTTCCAACGCATGGCG
GGTGATCTGGCGCTCGCCGGTGTCAATGTGGATCCCTACCAGACCAGCCACCCCATGCCGCGCGACCGTATCGCCAATCT
TGAAGTGCTCGTGAAGCAGAGCCGCTTCTACGACCGGGTCGATGCACCGGCCCTGCAGCTCCGCCATGAACTGGCGCGCG
CCAAGATTGCCTCCTATACGGCGGGGCAAAACGCCATTGCACGCGTTTTCAGGAAGAACCCCGGAGGCTTGCCGATCCTT
TATGCGGATGCGATCAACAGCTATCTTCATGGCAATCCGCGTTCTGCTCTTGCCAAGGTGGACCAGCTCATTTCCGCCCA
GCCCAACAACCCATATTTTCACGAGCTGCGCGGCGAAATCCTGATCAAGGTCAATCGGCCGCGTGAGGCCGCTGAGGCCT
ATGCGACTGCAGTCAGGCTTGCCCCGCCATCCGGTCTCCTGCAGGTGGGTCACGGCCAGGCGATGCTTGCAACCGGCCAG
CCGGACCTCGTGCGCCGCGCGGCGTCGGAGCTGAAAGCCGGCCTGACGAGTGAGCCCGAATATGTCAACGGCTACCGTTT
TCTCGCCCAGGCATACGGGCAGCTTGGAGATATCGGGTCGGCGGAACTCGCCACCGCCGAAGGCTACTTCCATGCCGGCG
CCTATCGCGATGCCAAAGTCATGGCGGCGCGCGCTCAGATGAAGTTGAAGCGCGGCTCGCCGGAATGGGTGCGGGCCCAG
GATATCATCGAATTTCGTGAAACAGGCAGGAAGTGA

Upstream 100 bases:

>100_bases
TAGGACGGCACACAAGGATGCAGCAAATAATAGAATCCGCGCAAAGTGCCTTCCAAAAATCCGTTTTTTCTCAAGCCGAT
GCGAGGGGGCCAGGCATTTT

Downstream 100 bases:

>100_bases
TATTCTTTGCGCGACGCCCAGGTTTGGGTCGCCGCCGCAACAGATAGGGCTATCCAGGCCAATCAAGGGAAGATTATGAA
GAACTCGCTTTTCGCCGCAT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MRNLALRKPCVMQFAPPSHCHDNDISVRTTVNLTRFAAVLIFRILTVILTVASMFASASPAAAQRSVPIVRDAEIEALIA
DYAKPILQAAGLSQSGIEIVLVNDHRFNAFVAGRRIFIHTGALLTAETPNEIIGVIAHEVAHLAGGHQHRLREQLARAQT
MAIVATLLGIGAGVAAAASNQGDLAQAGMGLAMGGSEAARRSLLAYQRTEEITADRSAIEYLERTGQSGRGMLITFQRMA
GDLALAGVNVDPYQTSHPMPRDRIANLEVLVKQSRFYDRVDAPALQLRHELARAKIASYTAGQNAIARVFRKNPGGLPIL
YADAINSYLHGNPRSALAKVDQLISAQPNNPYFHELRGEILIKVNRPREAAEAYATAVRLAPPSGLLQVGHGQAMLATGQ
PDLVRRAASELKAGLTSEPEYVNGYRFLAQAYGQLGDIGSAELATAEGYFHAGAYRDAKVMAARAQMKLKRGSPEWVRAQ
DIIEFRETGRK

Sequences:

>Translated_491_residues
MRNLALRKPCVMQFAPPSHCHDNDISVRTTVNLTRFAAVLIFRILTVILTVASMFASASPAAAQRSVPIVRDAEIEALIA
DYAKPILQAAGLSQSGIEIVLVNDHRFNAFVAGRRIFIHTGALLTAETPNEIIGVIAHEVAHLAGGHQHRLREQLARAQT
MAIVATLLGIGAGVAAAASNQGDLAQAGMGLAMGGSEAARRSLLAYQRTEEITADRSAIEYLERTGQSGRGMLITFQRMA
GDLALAGVNVDPYQTSHPMPRDRIANLEVLVKQSRFYDRVDAPALQLRHELARAKIASYTAGQNAIARVFRKNPGGLPIL
YADAINSYLHGNPRSALAKVDQLISAQPNNPYFHELRGEILIKVNRPREAAEAYATAVRLAPPSGLLQVGHGQAMLATGQ
PDLVRRAASELKAGLTSEPEYVNGYRFLAQAYGQLGDIGSAELATAEGYFHAGAYRDAKVMAARAQMKLKRGSPEWVRAQ
DIIEFRETGRK
>Mature_491_residues
MRNLALRKPCVMQFAPPSHCHDNDISVRTTVNLTRFAAVLIFRILTVILTVASMFASASPAAAQRSVPIVRDAEIEALIA
DYAKPILQAAGLSQSGIEIVLVNDHRFNAFVAGRRIFIHTGALLTAETPNEIIGVIAHEVAHLAGGHQHRLREQLARAQT
MAIVATLLGIGAGVAAAASNQGDLAQAGMGLAMGGSEAARRSLLAYQRTEEITADRSAIEYLERTGQSGRGMLITFQRMA
GDLALAGVNVDPYQTSHPMPRDRIANLEVLVKQSRFYDRVDAPALQLRHELARAKIASYTAGQNAIARVFRKNPGGLPIL
YADAINSYLHGNPRSALAKVDQLISAQPNNPYFHELRGEILIKVNRPREAAEAYATAVRLAPPSGLLQVGHGQAMLATGQ
PDLVRRAASELKAGLTSEPEYVNGYRFLAQAYGQLGDIGSAELATAEGYFHAGAYRDAKVMAARAQMKLKRGSPEWVRAQ
DIIEFRETGRK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=440, Percent_Identity=25.2272727272727, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53102; Mature: 53102

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLALRKPCVMQFAPPSHCHDNDISVRTTVNLTRFAAVLIFRILTVILTVASMFASASP
CCCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAAQRSVPIVRDAEIEALIADYAKPILQAAGLSQSGIEIVLVNDHRFNAFVAGRRIFIHT
CHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEE
GALLTAETPNEIIGVIAHEVAHLAGGHQHRLREQLARAQTMAIVATLLGIGAGVAAAASN
CEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
QGDLAQAGMGLAMGGSEAARRSLLAYQRTEEITADRSAIEYLERTGQSGRGMLITFQRMA
CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
GDLALAGVNVDPYQTSHPMPRDRIANLEVLVKQSRFYDRVDAPALQLRHELARAKIASYT
CCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
AGQNAIARVFRKNPGGLPILYADAINSYLHGNPRSALAKVDQLISAQPNNPYFHELRGEI
CCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEE
LIKVNRPREAAEAYATAVRLAPPSGLLQVGHGQAMLATGQPDLVRRAASELKAGLTSEPE
EEEECCCHHHHHHHHHHHEECCCCCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCC
YVNGYRFLAQAYGQLGDIGSAELATAEGYFHAGAYRDAKVMAARAQMKLKRGSPEWVRAQ
HHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH
DIIEFRETGRK
HHHHHHHCCCC
>Mature Secondary Structure
MRNLALRKPCVMQFAPPSHCHDNDISVRTTVNLTRFAAVLIFRILTVILTVASMFASASP
CCCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAAQRSVPIVRDAEIEALIADYAKPILQAAGLSQSGIEIVLVNDHRFNAFVAGRRIFIHT
CHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEE
GALLTAETPNEIIGVIAHEVAHLAGGHQHRLREQLARAQTMAIVATLLGIGAGVAAAASN
CEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
QGDLAQAGMGLAMGGSEAARRSLLAYQRTEEITADRSAIEYLERTGQSGRGMLITFQRMA
CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
GDLALAGVNVDPYQTSHPMPRDRIANLEVLVKQSRFYDRVDAPALQLRHELARAKIASYT
CCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
AGQNAIARVFRKNPGGLPILYADAINSYLHGNPRSALAKVDQLISAQPNNPYFHELRGEI
CCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEE
LIKVNRPREAAEAYATAVRLAPPSGLLQVGHGQAMLATGQPDLVRRAASELKAGLTSEPE
EEEECCCHHHHHHHHHHHEECCCCCCEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCC
YVNGYRFLAQAYGQLGDIGSAELATAEGYFHAGAYRDAKVMAARAQMKLKRGSPEWVRAQ
HHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH
DIIEFRETGRK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]