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The map label for this gene is nocM [H]

Identifier: 110633917

GI number: 110633917

Start: 1682232

End: 1683029

Strand: Direct

Name: nocM [H]

Synonym: Meso_1564

Alternate gene names: 110633917

Gene position: 1682232-1683029 (Clockwise)

Preceding gene: 110633916

Following gene: 110633918

Centisome position: 38.12

GC content: 56.52

Gene sequence:

>798_bases
ATGCCGCCACCCCTGCCGGTCAGGCGTTGGACCTTGGCACGCATTACAGGCCTAGTGCTGCTAAGCGGATGGGTGCTGCT
TGGCTTGGGAGTGCTCTATTTTCTGCTAAATTCCTGGAATCCGGAGCTCATTTCGCGATACACACCGAATTATGTTTCCG
GTCTTTGGGTCACCATCCAGCTTGTAGTGATCTCTATTTTGGCAGGCGCCGTCCTATCGGTCCCTATCGCCGTTGGACGC
CGAGCCGAAAGCCGGGTAATTTCATCCCTCGCTTATGCATATGTCTATTTCTTCCGCGGCACCCCCCTGCTTGCACAGAC
GTTTCTCATTTATTACGGTCTCGGCTCCTTCCGGCCGCAACTGGAGGCCGTTGGGCTTTGGACCTTCTTCCGCGATGCTT
GGTTCTGCGCCATCTTCGCCTTCACGCTCAATACCGCAGCTTACCAAGCTGAGATCCTGCGCGGAGCGGTAGAAAGCGTT
GGCCGCGGCCAATGGGAGGCGGCAGCCGCTCTTGCCTTCTCGCGATGGCAGACTTTGCGGAAGATCATCTTGCCTCAGGC
TTTGCTGGTTGCGCTACGGCCGTATGGAAACGAAATCATTCTGATGATCAAGGGATCCGCTATCGTGGCGATCATCACAG
TGTATGATCTGATGGGTGAGACGCGCCGCGCCTTCTCCCGGACCTTCGACTTTCAGACATATATCTGGGCCGCGCTCATC
TATCTCGTACTCGTTGAATTGCTGCGGATCGCGACTGAGCGCATTGAGCGCCGACTGACGCGACATCTGGGCCGCTAA

Upstream 100 bases:

>100_bases
TTTCCGTTCTCTCTTCCTTTGCGTTCTCGGCTATCGAGCGGCGGGTTTCTTCCAGCGGGCCGTCGCGATGAGCCTTCCCC
GCACGGCAGAGCTGGACGAT

Downstream 100 bases:

>100_bases
CTTTGCACAAGGAGGAACAGCCGAATGGCGAAAATTGCATTCATCGGGCTTGGCGTAATGGGCTACCCCATGGCCGCACA
TCTGAAAAACCGCGGCGGCC

Product: polar amino acid ABC transporter, inner membrane subunit

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPPPLPVRRWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQLVVISILAGAVLSVPIAVGR
RAESRVISSLAYAYVYFFRGTPLLAQTFLIYYGLGSFRPQLEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESV
GRGQWEAAAALAFSRWQTLRKIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFDFQTYIWAALI
YLVLVELLRIATERIERRLTRHLGR

Sequences:

>Translated_265_residues
MPPPLPVRRWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQLVVISILAGAVLSVPIAVGR
RAESRVISSLAYAYVYFFRGTPLLAQTFLIYYGLGSFRPQLEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESV
GRGQWEAAAALAFSRWQTLRKIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFDFQTYIWAALI
YLVLVELLRIATERIERRLTRHLGR
>Mature_264_residues
PPPLPVRRWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQLVVISILAGAVLSVPIAVGRR
AESRVISSLAYAYVYFFRGTPLLAQTFLIYYGLGSFRPQLEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESVG
RGQWEAAAALAFSRWQTLRKIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFDFQTYIWAALIY
LVLVELLRIATERIERRLTRHLGR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=35.2112676056338, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1788226, Length=222, Percent_Identity=36.9369369369369, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788645, Length=227, Percent_Identity=36.5638766519824, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=31.3636363636364, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=30.9859154929577, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=29.0476190476191, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=28.7037037037037, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786874, Length=228, Percent_Identity=27.6315789473684, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=26.0663507109005, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29967; Mature: 29836

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPLPVRRWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
LVVISILAGAVLSVPIAVGRRAESRVISSLAYAYVYFFRGTPLLAQTFLIYYGLGSFRPQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH
LEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESVGRGQWEAAAALAFSRWQTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFDFQTYIWAALI
HHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YLVLVELLRIATERIERRLTRHLGR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPPLPVRRWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
LVVISILAGAVLSVPIAVGRRAESRVISSLAYAYVYFFRGTPLLAQTFLIYYGLGSFRPQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH
LEAVGLWTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESVGRGQWEAAAALAFSRWQTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KIILPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFDFQTYIWAALI
HHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YLVLVELLRIATERIERRLTRHLGR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]