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The map label for this gene is nocQ [H]

Identifier: 110633916

GI number: 110633916

Start: 1681489

End: 1682202

Strand: Direct

Name: nocQ [H]

Synonym: Meso_1563

Alternate gene names: 110633916

Gene position: 1681489-1682202 (Clockwise)

Preceding gene: 110633915

Following gene: 110633917

Centisome position: 38.11

GC content: 59.52

Gene sequence:

>714_bases
ATGAATGGCGTTCTGACCCTCCTTAGTTTCGGCCCGGCAGGGTGGGGTGACGAAATCGCCTTGGGTGTGCTCGTCACCAT
TTCGCTGGCGCTCGTGACCCTTCCATTCGGCCTTGCAGCCGGTTTCACGGTCGCGCTTGCAAAGACATCGGAGGAGCCTA
GCCTTAGGCTTGCGGCCAATATCTACACCACAATTTTCCGCGGCTTGCCTGAGCTATTGACGCTATTCCTGGTCTTTTAC
GGCGCGCAGATCGCGGTGCAGCAGATCACGCGCGTTCTGGGCGCAACTGCCACCATAGAGATCAACGCTTTCGTGGCCGG
TATCGTGGCGCTCGGGGCGGTTTTTTCCGCTTACGCCAGCGAAGTGTTCGTATCCGCCTTCCGCGCCATTCCGCGCGGCC
AATACGAGGGTGCATACGCGGTGGGGCTTTCCCGCCGGCGCACCATGCAGCTGGTCATCTTGCCGCAACTTATCCGGCTG
GCTTTACCGGGCCTCTCCAATCTGTGGCTTATCCTTCTTAAAGAGACTTCGCTGGTGTCTGTCATCGGGCTTGCCGATAT
CCTGCGCCAGACGGGCATTGCGGCCCGCGTGAGCAAGGAAGCCTTTCTGTTCTTCGGCATTGCCTGCCTGCTTTATCTCG
GCCTTTCCGTTCTCTCTTCCTTTGCGTTCTCGGCTATCGAGCGGCGGGTTTCTTCCAGCGGGCCGTCGCGATGA

Upstream 100 bases:

>100_bases
GCTTTACCTGCGCAAGCCGACGCAGTTCAACACGCGGGTTCCCGCTGAAGAAGCCAACTGGCGTCGTTGGCATTGAGGTA
ATGACGGGCACGACCGGGAG

Downstream 100 bases:

>100_bases
GCCTTCCCCGCACGGCAGAGCTGGACGATATGCCGCCACCCCTGCCGGTCAGGCGTTGGACCTTGGCACGCATTACAGGC
CTAGTGCTGCTAAGCGGATG

Product: polar amino acid ABC transporter, inner membrane subunit

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNGVLTLLSFGPAGWGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAANIYTTIFRGLPELLTLFLVFY
GAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQLIRL
ALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSVLSSFAFSAIERRVSSSGPSR

Sequences:

>Translated_237_residues
MNGVLTLLSFGPAGWGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAANIYTTIFRGLPELLTLFLVFY
GAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQLIRL
ALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSVLSSFAFSAIERRVSSSGPSR
>Mature_237_residues
MNGVLTLLSFGPAGWGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAANIYTTIFRGLPELLTLFLVFY
GAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQLIRL
ALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSVLSSFAFSAIERRVSSSGPSR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=37.4429223744292, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=32, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=31.0679611650485, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1788645, Length=231, Percent_Identity=30.3030303030303, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=29.9539170506912, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787030, Length=210, Percent_Identity=28.0952380952381, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=30.3317535545024, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=26.7605633802817, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786874, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25157; Mature: 25157

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVLTLLSFGPAGWGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAAN
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
IYTTIFRGLPELLTLFLVFYGAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
EVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQLIRLALPGLSNLWLILLKETSLVS
HHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHH
VIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSVLSSFAFSAIERRVSSSGPSR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNGVLTLLSFGPAGWGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAAN
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
IYTTIFRGLPELLTLFLVFYGAQIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
EVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQLIRLALPGLSNLWLILLKETSLVS
HHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHH
VIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSVLSSFAFSAIERRVSSSGPSR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]