| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633887
Identifier: 110633887
GI number: 110633887
Start: 1649954
End: 1651198
Strand: Direct
Name: 110633887
Synonym: Meso_1534
Alternate gene names: NA
Gene position: 1649954-1651198 (Clockwise)
Preceding gene: 110633883
Following gene: 110633888
Centisome position: 37.39
GC content: 58.31
Gene sequence:
>1245_bases ATGTCCTTTTTCCATTTTCTTCGTGAAAACGCCCGCTGGCTCGCCGGCGGCTTTTTGCTCACCTTCTTTTCCTCTTTCGG CCAGACATTCTTTATCTCCATTTCCGCTGGCCACATCAGGCAAGAATACGGTCTCTCTCACGGCGCCTTCGGCATGATCT ACATGCTGGCCACCCTCGCCAGCGCATTCACGCTGACCAAGTTCGGGCAAATCGTCGACCGCTATTCGCCAAAGACCGTG ACGCTGATCATCGTCCCGATGCTAGCGCTTGCATGTATCTCCATGGCGTTGTCTCACTCTGTGGCTCTGCTTTGCCTGAC GATCTATCTCCTGCGGCTGTTCGGGCAGGGGATGATGACGCAGAACGCATTCACGGCAATGGGGCGGTGGTTTTCCGCCC AGCGCGGGCGTGCTGTTTCCATCACTACGCTTGGCCTGAATGGCGGGGAGGCGATTCTTCCATTGATATTCGTGACGCTT ACCGCCCTTGTCGGCTGGCGTAACGGCTGGTTTATCTCGGCCGGTTTCCTTCTGCTAATCGCACTGCCTGTCATATCTTC CCTAATGGCGGTGGAGCGCACACCGAGGGCCAGCGATCCGCCGGCGCGAGTTACGACCGGACGTTACTGGACACGCGCCG AGGTGGTTCGCGATCCCCTGTTCTACCTGTTGCTTTTGGGCGTCATGGCGCCGGGCTTTATTGGCACCACCATCGCGTTC CACCAGGTCTATCTTGTGGACTTGAGGGGCTGGACGCTGGAAATTTTTGCCTCGGCTTTCACCGTGTCGGCAAGCATGAC AGTGGTATTTGCATTGATCTCCGGCCAACTCATCGACCGCTTCTCGGCCGTGGCGATGCTGCCCGCCTTCCTCCTGCCGT TGGCCATAGCATGCTTTGTGCTCGCGACTTTCGATGCTCAATGGAGCGTGTTCGTCTTCATGGGGCTGCTCGGCATGTCG AATGGTTTCTCATCCACGCTTCTCGGCGCCCTCTGGCCTGAAATCTATGGAGTCCGCCACCTCGGAGCCGTTCGGGCACT GATCGTCGCCATTCTCGTTTTTGCAACGGGCGCTGCGCCGGGTCTGACGGGATATCTTATCGACATAGGCATATCCTATC CGCTGCAGATCGCGACGATGGGGCTTTACTGCCTGGGGGCCGCGCTCCTTATGCTCATTGTCTCGCGGCGGCTCCAGATG CGATCCTTGCAAATGGTCGAGGCGTCGGCTACCTCCGCGCCATGA
Upstream 100 bases:
>100_bases GTTGGCGATGGCTTGCGTCTCCGCAGCAACTGCCTTAATTCCCGCGGGTCTTGCCCGTATACGGCTGGGCCAAGCAGTCC GGTTCTCCAAGCAGAAGCTG
Downstream 100 bases:
>100_bases CTGTAACAGTTCGCTTCGCGCCGTCACCGACGGGGCAGATCCATATCGGCAACGCACGCACGGCGCTCTTCAACTGGCTG TTCGCCAGAAGGGCAGGGGG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Transporter Transmembrane Protein; Facilitator Superfamily Permease Protein; Facilitator Family Transporter
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSFFHFLRENARWLAGGFLLTFFSSFGQTFFISISAGHIRQEYGLSHGAFGMIYMLATLASAFTLTKFGQIVDRYSPKTV TLIIVPMLALACISMALSHSVALLCLTIYLLRLFGQGMMTQNAFTAMGRWFSAQRGRAVSITTLGLNGGEAILPLIFVTL TALVGWRNGWFISAGFLLLIALPVISSLMAVERTPRASDPPARVTTGRYWTRAEVVRDPLFYLLLLGVMAPGFIGTTIAF HQVYLVDLRGWTLEIFASAFTVSASMTVVFALISGQLIDRFSAVAMLPAFLLPLAIACFVLATFDAQWSVFVFMGLLGMS NGFSSTLLGALWPEIYGVRHLGAVRALIVAILVFATGAAPGLTGYLIDIGISYPLQIATMGLYCLGAALLMLIVSRRLQM RSLQMVEASATSAP
Sequences:
>Translated_414_residues MSFFHFLRENARWLAGGFLLTFFSSFGQTFFISISAGHIRQEYGLSHGAFGMIYMLATLASAFTLTKFGQIVDRYSPKTV TLIIVPMLALACISMALSHSVALLCLTIYLLRLFGQGMMTQNAFTAMGRWFSAQRGRAVSITTLGLNGGEAILPLIFVTL TALVGWRNGWFISAGFLLLIALPVISSLMAVERTPRASDPPARVTTGRYWTRAEVVRDPLFYLLLLGVMAPGFIGTTIAF HQVYLVDLRGWTLEIFASAFTVSASMTVVFALISGQLIDRFSAVAMLPAFLLPLAIACFVLATFDAQWSVFVFMGLLGMS NGFSSTLLGALWPEIYGVRHLGAVRALIVAILVFATGAAPGLTGYLIDIGISYPLQIATMGLYCLGAALLMLIVSRRLQM RSLQMVEASATSAP >Mature_413_residues SFFHFLRENARWLAGGFLLTFFSSFGQTFFISISAGHIRQEYGLSHGAFGMIYMLATLASAFTLTKFGQIVDRYSPKTVT LIIVPMLALACISMALSHSVALLCLTIYLLRLFGQGMMTQNAFTAMGRWFSAQRGRAVSITTLGLNGGEAILPLIFVTLT ALVGWRNGWFISAGFLLLIALPVISSLMAVERTPRASDPPARVTTGRYWTRAEVVRDPLFYLLLLGVMAPGFIGTTIAFH QVYLVDLRGWTLEIFASAFTVSASMTVVFALISGQLIDRFSAVAMLPAFLLPLAIACFVLATFDAQWSVFVFMGLLGMSN GFSSTLLGALWPEIYGVRHLGAVRALIVAILVFATGAAPGLTGYLIDIGISYPLQIATMGLYCLGAALLMLIVSRRLQMR SLQMVEASATSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44947; Mature: 44816
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFHFLRENARWLAGGFLLTFFSSFGQTFFISISAGHIRQEYGLSHGAFGMIYMLATLA CCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHH SAFTLTKFGQIVDRYSPKTVTLIIVPMLALACISMALSHSVALLCLTIYLLRLFGQGMMT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QNAFTAMGRWFSAQRGRAVSITTLGLNGGEAILPLIFVTLTALVGWRNGWFISAGFLLLI HHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALPVISSLMAVERTPRASDPPARVTTGRYWTRAEVVRDPLFYLLLLGVMAPGFIGTTIAF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HQVYLVDLRGWTLEIFASAFTVSASMTVVFALISGQLIDRFSAVAMLPAFLLPLAIACFV HHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATFDAQWSVFVFMGLLGMSNGFSSTLLGALWPEIYGVRHLGAVRALIVAILVFATGAAP HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLTGYLIDIGISYPLQIATMGLYCLGAALLMLIVSRRLQMRSLQMVEASATSAP CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SFFHFLRENARWLAGGFLLTFFSSFGQTFFISISAGHIRQEYGLSHGAFGMIYMLATLA CHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHH SAFTLTKFGQIVDRYSPKTVTLIIVPMLALACISMALSHSVALLCLTIYLLRLFGQGMMT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QNAFTAMGRWFSAQRGRAVSITTLGLNGGEAILPLIFVTLTALVGWRNGWFISAGFLLLI HHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALPVISSLMAVERTPRASDPPARVTTGRYWTRAEVVRDPLFYLLLLGVMAPGFIGTTIAF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HQVYLVDLRGWTLEIFASAFTVSASMTVVFALISGQLIDRFSAVAMLPAFLLPLAIACFV HHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATFDAQWSVFVFMGLLGMSNGFSSTLLGALWPEIYGVRHLGAVRALIVAILVFATGAAP HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLTGYLIDIGISYPLQIATMGLYCLGAALLMLIVSRRLQMRSLQMVEASATSAP CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA