| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ywrD [H]
Identifier: 110633862
GI number: 110633862
Start: 1607312
End: 1608916
Strand: Direct
Name: ywrD [H]
Synonym: Meso_1509
Alternate gene names: 110633862
Gene position: 1607312-1608916 (Clockwise)
Preceding gene: 110633861
Following gene: 110633863
Centisome position: 36.43
GC content: 62.49
Gene sequence:
>1605_bases ATGATCAGCGACACCATCATAGAGCGGGATTTCATGCGACCTGGCAAATCGGTCGCGCTGGCTGGAACGGCGATGATCGC TACGTCGCACCCGCAGGCGACCATGGCAGGCCTGAAAATCCTTGAAGCTGGCGGCAACGCTGTCGATGCGGCAATTGCCG CTGTTGCGCTTCAGGGTGTTATCGATCCTCATATGACCGGTATCGGCGGCGACTGTTTCGCACTCTACGCCGCAGCCGGG AAAGCGCCCATCGCCATCAACGGTTCCGGCCGAGCGCCTGCAGCCGCAACACTGGACCATTTCGAAGGCCTCGGCCTAGA CAAGATTCCGGACGGTTCGGTTCACGCCGTCACCGTCCCCGGCGCGGTCGATGCCTGGTGCAAGCTCAGCGAACGATACG GCAAGCTTGGGCTTGAGGCGATCCTCCAGCCCGCGATCGATGCCACCCGCGACGGCTTCGTCGTCATGCCGCGGGTCGCT CACGATTGGGCGCGATATGCCGACCGCCTGCGGCCATACCCGGCGTCGGTTAAGCAGTATTTGCCTGGCAATAAGGCGCC CGCCGTCGGTGACCGCCTGAACCATCCTGCCCTGGGGGAAACCCTGAAACGTATCGCCAGGGAAGGTCGCACGGCATTTT ACGAAGGCGAGGTCGCGCAGGACATGGTGTCGATGCTGCAAAGCCTCGGCGGTCTTCATACGCTGGAGGATTTCGCATCC TACGCGGCGTTCGAAACCGCGCCGATCTCCGCATCCTATCGTGGCTACGACCTCGTTGAGTGCCCACCGAATGGACAGGG CCTGGCGGCGCTTGTGATCGCGCGCATTCTCGACGGCTTCGATCTCGCCGCGCCGGATCTCTCGGAAGCCGATCGCATTC ACCTGTTCGCGGAAGCAACCAAGGCGGCCTATCGCCTGCGCGACATATATGTCGCCGACCCCGAGTATATGCGGCACTCC GCTGAGGAACTGCTGTCCGACGCCTTCATTGCCTCTTTGCGCAACAAGATCGACATGACGAAGGCGAGCGCCGTCGAAGA TTTCGACATCCCCCTTCACCGCGATACGGTCTATGTGACGGTGGTCGACGCCGACGGCAACGCCATCTCGTTGATCAACT CGCTCTTTTTTGCCTTCGGCAGCGGCATCTATGCGCCGAAGGCCGGCGTGCTGCTGCAAAATCGCGGCGCGGGCTTCTCA CTGAAGCGGGGACACCCGAACGCTATCGGCCCCGGCAAGCTGCCGTTTCATACCATCATCCCGGCGATGGTGCTGCGTGA CGGAAAGCCTATCATGTCTTACGGCGTGATGGGCGGGCAGTATCAGGCGGTGGGCCACGTACACATCCTGTCGCAGATCG TTGACCACGGCCTTGACGTGCAGATGGCAAGCGACCAGCCGCGCTCGTTCTTTACCGATGGCGCCATCTCCCTCGAGGTG ACCATTTCGGCGGACGTCCGGGCCGAACTGGAAAGGCGGGGCCACAAGACGCGCTGGGCGGACGAACCACTTGGCGGCTG CCAGGCGATCTGGATCGACCGCGAGCGCGGCATTCTGTGGGGCGCGTCTGACCACCGGAAAGACGGGGTTGCACTGGGTT ATTGA
Upstream 100 bases:
>100_bases GTCCAGTCGGTTCCGACTGTCCGGCGTCCTACCTGCAACTCCACAACCATGTGACTGTGATCTGCGACAGCGCAGCCGCT GCTCACCTCGAGGAGCCATA
Downstream 100 bases:
>100_bases CCATGGACAAGCGTACAGTCGTATCGATCCGGAATCTGAGCCTCCGGTTGCCCGCCGGGGCCGATCGCGAATTCGCGCTG AAGGAGATGAACCTCGATCT
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MISDTIIERDFMRPGKSVALAGTAMIATSHPQATMAGLKILEAGGNAVDAAIAAVALQGVIDPHMTGIGGDCFALYAAAG KAPIAINGSGRAPAAATLDHFEGLGLDKIPDGSVHAVTVPGAVDAWCKLSERYGKLGLEAILQPAIDATRDGFVVMPRVA HDWARYADRLRPYPASVKQYLPGNKAPAVGDRLNHPALGETLKRIAREGRTAFYEGEVAQDMVSMLQSLGGLHTLEDFAS YAAFETAPISASYRGYDLVECPPNGQGLAALVIARILDGFDLAAPDLSEADRIHLFAEATKAAYRLRDIYVADPEYMRHS AEELLSDAFIASLRNKIDMTKASAVEDFDIPLHRDTVYVTVVDADGNAISLINSLFFAFGSGIYAPKAGVLLQNRGAGFS LKRGHPNAIGPGKLPFHTIIPAMVLRDGKPIMSYGVMGGQYQAVGHVHILSQIVDHGLDVQMASDQPRSFFTDGAISLEV TISADVRAELERRGHKTRWADEPLGGCQAIWIDRERGILWGASDHRKDGVALGY
Sequences:
>Translated_534_residues MISDTIIERDFMRPGKSVALAGTAMIATSHPQATMAGLKILEAGGNAVDAAIAAVALQGVIDPHMTGIGGDCFALYAAAG KAPIAINGSGRAPAAATLDHFEGLGLDKIPDGSVHAVTVPGAVDAWCKLSERYGKLGLEAILQPAIDATRDGFVVMPRVA HDWARYADRLRPYPASVKQYLPGNKAPAVGDRLNHPALGETLKRIAREGRTAFYEGEVAQDMVSMLQSLGGLHTLEDFAS YAAFETAPISASYRGYDLVECPPNGQGLAALVIARILDGFDLAAPDLSEADRIHLFAEATKAAYRLRDIYVADPEYMRHS AEELLSDAFIASLRNKIDMTKASAVEDFDIPLHRDTVYVTVVDADGNAISLINSLFFAFGSGIYAPKAGVLLQNRGAGFS LKRGHPNAIGPGKLPFHTIIPAMVLRDGKPIMSYGVMGGQYQAVGHVHILSQIVDHGLDVQMASDQPRSFFTDGAISLEV TISADVRAELERRGHKTRWADEPLGGCQAIWIDRERGILWGASDHRKDGVALGY >Mature_534_residues MISDTIIERDFMRPGKSVALAGTAMIATSHPQATMAGLKILEAGGNAVDAAIAAVALQGVIDPHMTGIGGDCFALYAAAG KAPIAINGSGRAPAAATLDHFEGLGLDKIPDGSVHAVTVPGAVDAWCKLSERYGKLGLEAILQPAIDATRDGFVVMPRVA HDWARYADRLRPYPASVKQYLPGNKAPAVGDRLNHPALGETLKRIAREGRTAFYEGEVAQDMVSMLQSLGGLHTLEDFAS YAAFETAPISASYRGYDLVECPPNGQGLAALVIARILDGFDLAAPDLSEADRIHLFAEATKAAYRLRDIYVADPEYMRHS AEELLSDAFIASLRNKIDMTKASAVEDFDIPLHRDTVYVTVVDADGNAISLINSLFFAFGSGIYAPKAGVLLQNRGAGFS LKRGHPNAIGPGKLPFHTIIPAMVLRDGKPIMSYGVMGGQYQAVGHVHILSQIVDHGLDVQMASDQPRSFFTDGAISLEV TISADVRAELERRGHKTRWADEPLGGCQAIWIDRERGILWGASDHRKDGVALGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=537, Percent_Identity=29.4227188081937, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI73915090, Length=537, Percent_Identity=29.4227188081937, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI73915096, Length=537, Percent_Identity=29.4227188081937, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI73915094, Length=537, Percent_Identity=29.4227188081937, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI113429324, Length=536, Percent_Identity=28.9179104477612, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI113429326, Length=541, Percent_Identity=28.4658040665434, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI153266885, Length=542, Percent_Identity=24.7232472324723, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI153266901, Length=543, Percent_Identity=24.8618784530387, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI109148539, Length=511, Percent_Identity=27.9843444227006, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI153266907, Length=538, Percent_Identity=23.6059479553903, Blast_Score=116, Evalue=6e-26, Organism=Homo sapiens, GI30581157, Length=227, Percent_Identity=30.8370044052863, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI30581155, Length=227, Percent_Identity=30.8370044052863, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1789856, Length=552, Percent_Identity=33.3333333333333, Blast_Score=257, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17506189, Length=498, Percent_Identity=27.710843373494, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI72000294, Length=453, Percent_Identity=25.8278145695364, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI212646519, Length=453, Percent_Identity=25.8278145695364, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17542894, Length=551, Percent_Identity=26.1343012704174, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI193208245, Length=517, Percent_Identity=25.531914893617, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI193208247, Length=517, Percent_Identity=25.531914893617, Blast_Score=108, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6323330, Length=439, Percent_Identity=24.1457858769932, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24642670, Length=548, Percent_Identity=26.6423357664234, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24642666, Length=548, Percent_Identity=26.6423357664234, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI161077878, Length=548, Percent_Identity=26.6423357664234, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI45551474, Length=548, Percent_Identity=26.6423357664234, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI161077880, Length=548, Percent_Identity=26.6423357664234, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI18859893, Length=502, Percent_Identity=27.0916334661355, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI161077496, Length=410, Percent_Identity=27.8048780487805, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI18859741, Length=547, Percent_Identity=24.3144424131627, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 57107; Mature: 57107
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDTIIERDFMRPGKSVALAGTAMIATSHPQATMAGLKILEAGGNAVDAAIAAVALQGV CCCCHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHEECCCCHHHHHHHHHHHHHC IDPHMTGIGGDCFALYAAAGKAPIAINGSGRAPAAATLDHFEGLGLDKIPDGSVHAVTVP CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECC GAVDAWCKLSERYGKLGLEAILQPAIDATRDGFVVMPRVAHDWARYADRLRPYPASVKQY CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHH LPGNKAPAVGDRLNHPALGETLKRIAREGRTAFYEGEVAQDMVSMLQSLGGLHTLEDFAS CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHH YAAFETAPISASYRGYDLVECPPNGQGLAALVIARILDGFDLAAPDLSEADRIHLFAEAT HHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHH KAAYRLRDIYVADPEYMRHSAEELLSDAFIASLRNKIDMTKASAVEDFDIPLHRDTVYVT HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEE VVDADGNAISLINSLFFAFGSGIYAPKAGVLLQNRGAGFSLKRGHPNAIGPGKLPFHTII EEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCHHHHH PAMVLRDGKPIMSYGVMGGQYQAVGHVHILSQIVDHGLDVQMASDQPRSFFTDGAISLEV HHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCEEEEE TISADVRAELERRGHKTRWADEPLGGCQAIWIDRERGILWGASDHRKDGVALGY EEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MISDTIIERDFMRPGKSVALAGTAMIATSHPQATMAGLKILEAGGNAVDAAIAAVALQGV CCCCHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHEECCCCHHHHHHHHHHHHHC IDPHMTGIGGDCFALYAAAGKAPIAINGSGRAPAAATLDHFEGLGLDKIPDGSVHAVTVP CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECC GAVDAWCKLSERYGKLGLEAILQPAIDATRDGFVVMPRVAHDWARYADRLRPYPASVKQY CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHH LPGNKAPAVGDRLNHPALGETLKRIAREGRTAFYEGEVAQDMVSMLQSLGGLHTLEDFAS CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHH YAAFETAPISASYRGYDLVECPPNGQGLAALVIARILDGFDLAAPDLSEADRIHLFAEAT HHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHH KAAYRLRDIYVADPEYMRHSAEELLSDAFIASLRNKIDMTKASAVEDFDIPLHRDTVYVT HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEE VVDADGNAISLINSLFFAFGSGIYAPKAGVLLQNRGAGFSLKRGHPNAIGPGKLPFHTII EEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCHHHHH PAMVLRDGKPIMSYGVMGGQYQAVGHVHILSQIVDHGLDVQMASDQPRSFFTDGAISLEV HHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCEEEEE TISADVRAELERRGHKTRWADEPLGGCQAIWIDRERGILWGASDHRKDGVALGY EEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]