| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110633823
Identifier: 110633823
GI number: 110633823
Start: 1569311
End: 1569595
Strand: Direct
Name: 110633823
Synonym: Meso_1470
Alternate gene names: NA
Gene position: 1569311-1569595 (Clockwise)
Preceding gene: 110633822
Following gene: 110633828
Centisome position: 35.57
GC content: 62.11
Gene sequence:
>285_bases ATGTCATTTCTGAAGCGTTTGTTCGGCGGCGCCGAGAAGTCTCCCGCGCAAGAGACGGTCGGCACGCCGGAGGAGCACAA GGGCTTTACCATCCGGGCTACGCCCTTTTCCGAGCAGGGACAGTTCCAGACCTGCGGCGTCATTTCCAAGGAAGTCGGCG GGGAGTTGAAAGAGCACCGTTTCGTTCGGGCTGATCGCTTTCCCAGTGCCGATCTCGCAGCCGAGCATGCGATCCGCAAG GGCCGCCAGATCGTGGACGAGCAGGGCGACGCCCTGTTCGGTTAG
Upstream 100 bases:
>100_bases TTTTCACGGCGGCTTCGGCCGACTGACAATCCGGCATGCCCCGGTCTGGTCCTGAATGCGCGGCCGCGCTAGCTTCCGGA ATCGATAGAGGAGAGTTGCC
Downstream 100 bases:
>100_bases TCCCGCTTTGCCGGAGAGGGAATAGCCGAAATAGGCGGTAAAGCCGCCTTCTGGCCTACTTTCCTTTTCCCTGATCTCCT ATTGCCCGAATTTCAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSFLKRLFGGAEKSPAQETVGTPEEHKGFTIRATPFSEQGQFQTCGVISKEVGGELKEHRFVRADRFPSADLAAEHAIRK GRQIVDEQGDALFG
Sequences:
>Translated_94_residues MSFLKRLFGGAEKSPAQETVGTPEEHKGFTIRATPFSEQGQFQTCGVISKEVGGELKEHRFVRADRFPSADLAAEHAIRK GRQIVDEQGDALFG >Mature_93_residues SFLKRLFGGAEKSPAQETVGTPEEHKGFTIRATPFSEQGQFQTCGVISKEVGGELKEHRFVRADRFPSADLAAEHAIRKG RQIVDEQGDALFG
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10335; Mature: 10203
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLKRLFGGAEKSPAQETVGTPEEHKGFTIRATPFSEQGQFQTCGVISKEVGGELKEHR CHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHH FVRADRFPSADLAAEHAIRKGRQIVDEQGDALFG HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SFLKRLFGGAEKSPAQETVGTPEEHKGFTIRATPFSEQGQFQTCGVISKEVGGELKEHR HHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHH FVRADRFPSADLAAEHAIRKGRQIVDEQGDALFG HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA