Click here to switch to the map view.

The map label for this gene is 110633819

Identifier: 110633819

GI number: 110633819

Start: 1567046

End: 1567339

Strand: Direct

Name: 110633819

Synonym: Meso_1466

Alternate gene names: NA

Gene position: 1567046-1567339 (Clockwise)

Preceding gene: 110633818

Following gene: 110633820

Centisome position: 35.51

GC content: 59.52

Gene sequence:

>294_bases
GTGACCACGTATATCGTACTTTCCAACTGGACAGAGCAGGGCATCAAAACTGTGCGCGAGTCGCCGCGGCGGCTCGATGC
GGCTAAAGCCCTGGTTGAGGAAATGGGGGGGTCGATCCGGGCGTTCTACCTGACCATGGGGGAATACGACATGGTCGTTA
TCTGCGAAGCGCCGGATGATGCGGTAGCCGCTCGCTTTGCCCTCGCGCTGGGCTCTCAAGGCAATGTGAAGACCTGCACC
ATGAAAGCGTTTCCCGAGGAGGCCTATCGGGAAATCATCCGCTCGCTGGGCTGA

Upstream 100 bases:

>100_bases
CTAGCCAGGCAGGCGCATACTCGGCTCCGGGTGGTGGGAAAACGTTCCGGCGCCTGAGCACTGCGCTCCGCAGACGTCAC
GGCGCCGAGGGAGGTGTGAC

Downstream 100 bases:

>100_bases
GGCCTGAGGCTTGACAGGCGCGTCCGGCCGATGCACGACCCAGGTATGGCCCAGACGCGCCTTTTCATATCCACCTCCGG
CCAAGGCCTCTACGAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: GYD Domain Superfamily; GYD Domain Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTTYIVLSNWTEQGIKTVRESPRRLDAAKALVEEMGGSIRAFYLTMGEYDMVVICEAPDDAVAARFALALGSQGNVKTCT
MKAFPEEAYREIIRSLG

Sequences:

>Translated_97_residues
MTTYIVLSNWTEQGIKTVRESPRRLDAAKALVEEMGGSIRAFYLTMGEYDMVVICEAPDDAVAARFALALGSQGNVKTCT
MKAFPEEAYREIIRSLG
>Mature_96_residues
TTYIVLSNWTEQGIKTVRESPRRLDAAKALVEEMGGSIRAFYLTMGEYDMVVICEAPDDAVAARFALALGSQGNVKTCTM
KAFPEEAYREIIRSLG

Specific function: Unknown

COG id: COG4274

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10725; Mature: 10594

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYIVLSNWTEQGIKTVRESPRRLDAAKALVEEMGGSIRAFYLTMGEYDMVVICEAPDD
CCEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCH
AVAARFALALGSQGNVKTCTMKAFPEEAYREIIRSLG
HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
TTYIVLSNWTEQGIKTVRESPRRLDAAKALVEEMGGSIRAFYLTMGEYDMVVICEAPDD
CEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCH
AVAARFALALGSQGNVKTCTMKAFPEEAYREIIRSLG
HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA