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The map label for this gene is yjbQ [C]

Identifier: 110633820

GI number: 110633820

Start: 1567370

End: 1567804

Strand: Direct

Name: yjbQ [C]

Synonym: Meso_1467

Alternate gene names: 110633820

Gene position: 1567370-1567804 (Clockwise)

Preceding gene: 110633819

Following gene: 110633822

Centisome position: 35.52

GC content: 62.53

Gene sequence:

>435_bases
ATGCACGACCCAGGTATGGCCCAGACGCGCCTTTTCATATCCACCTCCGGCCAAGGCCTCTACGAGTTTACGCGGGAAGC
TGCCGATTTCGTACGCCGTCAGCCGGTGGAGGAGGGGCTGCTCACGGTCTTCGTGCGCCACACCTCCTGCTCGCTTATCA
TTCAGGAGAATGCCGATCCTGACGTGAAGCGGGACCTCGATGCATTCTTCCGCAGGCTCGTGCCCTCGTCGAGCGATCCG
TCCATGGACTGGATCGTCCATCGCATCGAGGGGCCGGACGATATGCCGGCGCATATCAAGGCGGCGCTTACGCAGACCTC
GATCGGCGTTCCCGTATCGGGGGGCCGGATGCTGCTCGGCACCTGGCAGGGCATCTACCTTTTCGAACACCGCGACCAGC
CGCACCGGCGCGAGATCATCCTTCACTTGAGCTAG

Upstream 100 bases:

>100_bases
TGTGAAGACCTGCACCATGAAAGCGTTTCCCGAGGAGGCCTATCGGGAAATCATCCGCTCGCTGGGCTGAGGCCTGAGGC
TTGACAGGCGCGTCCGGCCG

Downstream 100 bases:

>100_bases
AGCATCGGCCCGAAAACCGGAATCGGTTCTCGGGTGCCTCCCAGAGGAGGCAGGGCGCTGCGGCAAAACCGAGGAGTGAT
CCTCACCGGTGAAAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MHDPGMAQTRLFISTSGQGLYEFTREAADFVRRQPVEEGLLTVFVRHTSCSLIIQENADPDVKRDLDAFFRRLVPSSSDP
SMDWIVHRIEGPDDMPAHIKAALTQTSIGVPVSGGRMLLGTWQGIYLFEHRDQPHRREIILHLS

Sequences:

>Translated_144_residues
MHDPGMAQTRLFISTSGQGLYEFTREAADFVRRQPVEEGLLTVFVRHTSCSLIIQENADPDVKRDLDAFFRRLVPSSSDP
SMDWIVHRIEGPDDMPAHIKAALTQTSIGVPVSGGRMLLGTWQGIYLFEHRDQPHRREIILHLS
>Mature_144_residues
MHDPGMAQTRLFISTSGQGLYEFTREAADFVRRQPVEEGLLTVFVRHTSCSLIIQENADPDVKRDLDAFFRRLVPSSSDP
SMDWIVHRIEGPDDMPAHIKAALTQTSIGVPVSGGRMLLGTWQGIYLFEHRDQPHRREIILHLS

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=134, Percent_Identity=41.7910447761194, Blast_Score=102, Evalue=7e-24,
Organism=Drosophila melanogaster, GI221476594, Length=106, Percent_Identity=41.5094339622642, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI221476589, Length=141, Percent_Identity=35.4609929078014, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16338; Mature: 16338

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDPGMAQTRLFISTSGQGLYEFTREAADFVRRQPVEEGLLTVFVRHTSCSLIIQENADP
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEEECCCEEEEEECCCCC
DVKRDLDAFFRRLVPSSSDPSMDWIVHRIEGPDDMPAHIKAALTQTSIGVPVSGGRMLLG
CHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
TWQGIYLFEHRDQPHRREIILHLS
ECCEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MHDPGMAQTRLFISTSGQGLYEFTREAADFVRRQPVEEGLLTVFVRHTSCSLIIQENADP
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEEECCCEEEEEECCCCC
DVKRDLDAFFRRLVPSSSDPSMDWIVHRIEGPDDMPAHIKAALTQTSIGVPVSGGRMLLG
CHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
TWQGIYLFEHRDQPHRREIILHLS
ECCEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]