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The map label for this gene is pdtaR [H]

Identifier: 110633801

GI number: 110633801

Start: 1541018

End: 1541608

Strand: Direct

Name: pdtaR [H]

Synonym: Meso_1448

Alternate gene names: 110633801

Gene position: 1541018-1541608 (Clockwise)

Preceding gene: 110633800

Following gene: 110633802

Centisome position: 34.92

GC content: 62.44

Gene sequence:

>591_bases
ATGTCGCCTCGGTCGCTTTCTGTCCTGGTTATCGATGAAAATACGGTGCGCGCCGCCATCATAGAGGCGGGCTTGCGCGA
GGCAGGCCATGAGTTCGTGACGGTGGTGCACGACGTCAATGGAATCGCGCAGCGAATCGCGGCCGTCGAGCCGGATGTCA
TCGTCATTGATCTGGAAAACCCAAATCGCGACATGCTTGAAAGCATGTTCAGCCTGTCCCGCGCCGTGAAGCGGCCGATC
GCGATGTTCGTCGACCAGTCGGATCAGAGCGCCATCGAGGCGGCCGTGGAGGCGGGCGTGTCCGCTTATGTGGTCGACGG
CCTTCGGCAGGATCGCGTAAAGCCGATCGTCGACATGGCCATCAGCCGCTTCAACGCCTATTCGCGCATGGCGCGCGAGC
TGGAGGACGCGCGAAGCGAGCTCGAAAACCGCAAGCTGATCGACCGCGCCAAAGGGATACTCATGCGCTCGCGCGGCCTT
ACGGAAGAGCAGGCCTACGCGCTCCTGCGCCGCACGGCCATGAACCAGAACCGGAAGATTTCGGAGATCGCCCAGAGCCT
CATTCTGGCCGCGGGGCTGCTCGAGGAGTAA

Upstream 100 bases:

>100_bases
GCCTGCCGGCGACAACGGTATCTTCTACGCCTGACATTCGTCTTTCGCCCTTGTGATTTTTTTGCGTTGCACAATCATTG
TGCATGCGCAAAATAGAGGC

Downstream 100 bases:

>100_bases
CCGCTATGGCCGATACGCATGCAATCACAGCCGGATTCCTGCCATTGCTCGACAGCGCCATTTTGGTCGCGGCGAAGGAA
AAAGGCTTCGCGGAACGCGA

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSPRSLSVLVIDENTVRAAIIEAGLREAGHEFVTVVHDVNGIAQRIAAVEPDVIVIDLENPNRDMLESMFSLSRAVKRPI
AMFVDQSDQSAIEAAVEAGVSAYVVDGLRQDRVKPIVDMAISRFNAYSRMARELEDARSELENRKLIDRAKGILMRSRGL
TEEQAYALLRRTAMNQNRKISEIAQSLILAAGLLEE

Sequences:

>Translated_196_residues
MSPRSLSVLVIDENTVRAAIIEAGLREAGHEFVTVVHDVNGIAQRIAAVEPDVIVIDLENPNRDMLESMFSLSRAVKRPI
AMFVDQSDQSAIEAAVEAGVSAYVVDGLRQDRVKPIVDMAISRFNAYSRMARELEDARSELENRKLIDRAKGILMRSRGL
TEEQAYALLRRTAMNQNRKISEIAQSLILAAGLLEE
>Mature_195_residues
SPRSLSVLVIDENTVRAAIIEAGLREAGHEFVTVVHDVNGIAQRIAAVEPDVIVIDLENPNRDMLESMFSLSRAVKRPIA
MFVDQSDQSAIEAAVEAGVSAYVVDGLRQDRVKPIVDMAISRFNAYSRMARELEDARSELENRKLIDRAKGILMRSRGLT
EEQAYALLRRTAMNQNRKISEIAQSLILAAGLLEE

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21761; Mature: 21630

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRSLSVLVIDENTVRAAIIEAGLREAGHEFVTVVHDVNGIAQRIAAVEPDVIVIDLEN
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PNRDMLESMFSLSRAVKRPIAMFVDQSDQSAIEAAVEAGVSAYVVDGLRQDRVKPIVDMA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ISRFNAYSRMARELEDARSELENRKLIDRAKGILMRSRGLTEEQAYALLRRTAMNQNRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCH
SEIAQSLILAAGLLEE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPRSLSVLVIDENTVRAAIIEAGLREAGHEFVTVVHDVNGIAQRIAAVEPDVIVIDLEN
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PNRDMLESMFSLSRAVKRPIAMFVDQSDQSAIEAAVEAGVSAYVVDGLRQDRVKPIVDMA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ISRFNAYSRMARELEDARSELENRKLIDRAKGILMRSRGLTEEQAYALLRRTAMNQNRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCH
SEIAQSLILAAGLLEE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]