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The map label for this gene is nrtA [H]

Identifier: 110633802

GI number: 110633802

Start: 1541614

End: 1542825

Strand: Direct

Name: nrtA [H]

Synonym: Meso_1449

Alternate gene names: 110633802

Gene position: 1541614-1542825 (Clockwise)

Preceding gene: 110633801

Following gene: 110633803

Centisome position: 34.94

GC content: 66.42

Gene sequence:

>1212_bases
ATGGCCGATACGCATGCAATCACAGCCGGATTCCTGCCATTGCTCGACAGCGCCATTTTGGTCGCGGCGAAGGAAAAAGG
CTTCGCGGAACGCGAAGGCATCGATCTTACCCTGGTGCGGGAAACCTCCTGGGCCAGCATCCGTGACCGAATCGCTGTCG
GCCACTTCGAGGCCGCGCACATGCTGGCGCCCATGCCGATCGCCGCCACGCTCGGCCTCACGCCAATCCGCCTGGACCTG
GTGGCGCCAATGGCGCTGGGGCTGGGCGGAAACGCGATCAGCGTCAGCCGCGCGCTCTGGAAGGAGATGGAGAGCGCCGG
TGCCCGAGGCGTGGGCGATCCCGCTGCGGCTGGGAATGCCCTAAGGCAGGTTATCGCCGGAAGGCGCGGGACAGCGGAAG
GCCGGCTTCGCTTTGCCGTCGTTCATCCCCATTCCGGGCACAATCTCGAGCTCCGCTACTGGCTGGCCGCGAGCGGCATC
GATCCCGAGCGGGACCTTGATGTCGCCGTGCTGCCGCCGCCCTTGATGCCAGACGCGATCGCTGCGGGAAGCATCGACGG
TTTCTGCGTCGGCGAGCCATGGAGCAGCGTCGCCGTCGCCCGGGGTCATGCGCATATCGCGGCGGTCAAGGCCGCGATCT
GGAAGTCGAGCCCCGAGAAGGTGCTGGGGGTGCGCGCCGATTGGGCCGCAGCGAACGGAGAGGAGCTGTTCCGCCTCCTG
CGCGCGCTTTACCGCGCGGCCGAATGGTGCGGGAAAGCGGACAACTGCGCCGAACTGGCAGAGATCCTTGCCGGGGAGCG
CTATCTCGGCCAGCCGGTTGAAATCGTCCTCGGCGCGCTCGAAGGTCGGCTCGACACCGGCCACGGATTGCAAAACGTGC
CGGACTTCTTCCTTCCCGCCGCGCGGGCGGCTACTTTCCCCTGGCGCAGCCATGCGCTTTGGCTCTATTCGCAGATGGTT
CGTTGGGGGCAGGTGGCGCATAGCGCTGCCAATGCGGAAAAAGCCCGCAATTCCTTCCGGCCGGACCTTTATCGCGCCGC
GCTCCAGCCGCTCGGTGTTCCCGTGCCGGTGGAAGACATGAAGCCAGAGGGCGCCGCACTTGCTCCAGGCGCGGGCGGCT
TCTTCGACGGTGCCGTTTTCGATCCCGACAAGCTCGACGCCTATATCGCGGGCCAACGTCCTGCCGGTAAAGGCAGCGAC
CCTTCCATTTGA

Upstream 100 bases:

>100_bases
ACGCGCTCCTGCGCCGCACGGCCATGAACCAGAACCGGAAGATTTCGGAGATCGCCCAGAGCCTCATTCTGGCCGCGGGG
CTGCTCGAGGAGTAACCGCT

Downstream 100 bases:

>100_bases
TCTTTTGCGGATTGAATGGTTCGGGAACGCCGCCGCCGGTCAGGAGGCCTGCAGCAAAGAGCCTATTTTTTAGGCGCAAA
CTTCAATTGCCTAAGAAATA

Product: nitrate transporter component, nrtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MADTHAITAGFLPLLDSAILVAAKEKGFAEREGIDLTLVRETSWASIRDRIAVGHFEAAHMLAPMPIAATLGLTPIRLDL
VAPMALGLGGNAISVSRALWKEMESAGARGVGDPAAAGNALRQVIAGRRGTAEGRLRFAVVHPHSGHNLELRYWLAASGI
DPERDLDVAVLPPPLMPDAIAAGSIDGFCVGEPWSSVAVARGHAHIAAVKAAIWKSSPEKVLGVRADWAAANGEELFRLL
RALYRAAEWCGKADNCAELAEILAGERYLGQPVEIVLGALEGRLDTGHGLQNVPDFFLPAARAATFPWRSHALWLYSQMV
RWGQVAHSAANAEKARNSFRPDLYRAALQPLGVPVPVEDMKPEGAALAPGAGGFFDGAVFDPDKLDAYIAGQRPAGKGSD
PSI

Sequences:

>Translated_403_residues
MADTHAITAGFLPLLDSAILVAAKEKGFAEREGIDLTLVRETSWASIRDRIAVGHFEAAHMLAPMPIAATLGLTPIRLDL
VAPMALGLGGNAISVSRALWKEMESAGARGVGDPAAAGNALRQVIAGRRGTAEGRLRFAVVHPHSGHNLELRYWLAASGI
DPERDLDVAVLPPPLMPDAIAAGSIDGFCVGEPWSSVAVARGHAHIAAVKAAIWKSSPEKVLGVRADWAAANGEELFRLL
RALYRAAEWCGKADNCAELAEILAGERYLGQPVEIVLGALEGRLDTGHGLQNVPDFFLPAARAATFPWRSHALWLYSQMV
RWGQVAHSAANAEKARNSFRPDLYRAALQPLGVPVPVEDMKPEGAALAPGAGGFFDGAVFDPDKLDAYIAGQRPAGKGSD
PSI
>Mature_402_residues
ADTHAITAGFLPLLDSAILVAAKEKGFAEREGIDLTLVRETSWASIRDRIAVGHFEAAHMLAPMPIAATLGLTPIRLDLV
APMALGLGGNAISVSRALWKEMESAGARGVGDPAAAGNALRQVIAGRRGTAEGRLRFAVVHPHSGHNLELRYWLAASGID
PERDLDVAVLPPPLMPDAIAAGSIDGFCVGEPWSSVAVARGHAHIAAVKAAIWKSSPEKVLGVRADWAAANGEELFRLLR
ALYRAAEWCGKADNCAELAEILAGERYLGQPVEIVLGALEGRLDTGHGLQNVPDFFLPAARAATFPWRSHALWLYSQMVR
WGQVAHSAANAEKARNSFRPDLYRAALQPLGVPVPVEDMKPEGAALAPGAGGFFDGAVFDPDKLDAYIAGQRPAGKGSDP
SI

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42688; Mature: 42557

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTHAITAGFLPLLDSAILVAAKEKGFAEREGIDLTLVRETSWASIRDRIAVGHFEAAH
CCCCHHHHHHHHHHHCCHHEEEECCCCCHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHH
MLAPMPIAATLGLTPIRLDLVAPMALGLGGNAISVSRALWKEMESAGARGVGDPAAAGNA
HHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LRQVIAGRRGTAEGRLRFAVVHPHSGHNLELRYWLAASGIDPERDLDVAVLPPPLMPDAI
HHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCHH
AAGSIDGFCVGEPWSSVAVARGHAHIAAVKAAIWKSSPEKVLGVRADWAAANGEELFRLL
HCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHH
RALYRAAEWCGKADNCAELAEILAGERYLGQPVEIVLGALEGRLDTGHGLQNVPDFFLPA
HHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ARAATFPWRSHALWLYSQMVRWGQVAHSAANAEKARNSFRPDLYRAALQPLGVPVPVEDM
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCC
KPEGAALAPGAGGFFDGAVFDPDKLDAYIAGQRPAGKGSDPSI
CCCCCEECCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ADTHAITAGFLPLLDSAILVAAKEKGFAEREGIDLTLVRETSWASIRDRIAVGHFEAAH
CCCHHHHHHHHHHHCCHHEEEECCCCCHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHH
MLAPMPIAATLGLTPIRLDLVAPMALGLGGNAISVSRALWKEMESAGARGVGDPAAAGNA
HHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LRQVIAGRRGTAEGRLRFAVVHPHSGHNLELRYWLAASGIDPERDLDVAVLPPPLMPDAI
HHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCHH
AAGSIDGFCVGEPWSSVAVARGHAHIAAVKAAIWKSSPEKVLGVRADWAAANGEELFRLL
HCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHH
RALYRAAEWCGKADNCAELAEILAGERYLGQPVEIVLGALEGRLDTGHGLQNVPDFFLPA
HHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ARAATFPWRSHALWLYSQMVRWGQVAHSAANAEKARNSFRPDLYRAALQPLGVPVPVEDM
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCC
KPEGAALAPGAGGFFDGAVFDPDKLDAYIAGQRPAGKGSDPSI
CCCCCEECCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]