| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is fabZ
Identifier: 110633743
GI number: 110633743
Start: 1484256
End: 1484726
Strand: Direct
Name: fabZ
Synonym: Meso_1390
Alternate gene names: 110633743
Gene position: 1484256-1484726 (Clockwise)
Preceding gene: 110633742
Following gene: 110633744
Centisome position: 33.64
GC content: 56.48
Gene sequence:
>471_bases ATGGCCGACGGTGTGTCGCCCGCGATGGAAAGCCTCGACATTTTGAACGTGCTGCGACTCCTGCCGCACCGCTATCCATT TCTGCTGGTGGACAGGATTGTAGAAATAGATGGCGACAACTCAGCCATCGGCATCAAGAATGTCACGGTGAACGAGCCCC ACTTCATGGGGCATTTCCCGGAGCGTCCGGTCATGCCGGGGGTGCTGATCATCGAGGCTATGGCCCAGACCGCAGGAGCC ATCTGCATTCAGCATGCAAAGCAAATAAAGCCGTCGGTCGTCTATTTTCTGACAATTGAGAATGCGAAGTTTCGCAAGCC CGTGGTGCCGGGCGACAGAATGGAAATCCATGTGAAGAAGGTGAAGCAGCGCGGCATGATCTGGAAGTTTGCCTGCGAGG CGATAGTAGACGGCGGAAAGGTTGCGGAGGCCATGATCTCGGCCCTGCTCTCGGCCGAAGAACCGGAATGA
Upstream 100 bases:
>100_bases GATGGGCCGGCGTGCCGGCCAAGCCCATGCGGCAGGCGTTCCGCGAAATCGCGGCGCTGCGCAGCCTGGTGCAGGATATG CGGAAGGGGAGTAAGGGATA
Downstream 100 bases:
>100_bases CCTGACGATGGCGGAAGCGTTCATCCACCCGACGGCGATAGTCGAAGAAGGGGCCGTACTTGGTGCCGGCGTAAGAATCG GGCCGTTCTGCCATGTCTCC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MADGVSPAMESLDILNVLRLLPHRYPFLLVDRIVEIDGDNSAIGIKNVTVNEPHFMGHFPERPVMPGVLIIEAMAQTAGA ICIQHAKQIKPSVVYFLTIENAKFRKPVVPGDRMEIHVKKVKQRGMIWKFACEAIVDGGKVAEAMISALLSAEEPE
Sequences:
>Translated_156_residues MADGVSPAMESLDILNVLRLLPHRYPFLLVDRIVEIDGDNSAIGIKNVTVNEPHFMGHFPERPVMPGVLIIEAMAQTAGA ICIQHAKQIKPSVVYFLTIENAKFRKPVVPGDRMEIHVKKVKQRGMIWKFACEAIVDGGKVAEAMISALLSAEEPE >Mature_155_residues ADGVSPAMESLDILNVLRLLPHRYPFLLVDRIVEIDGDNSAIGIKNVTVNEPHFMGHFPERPVMPGVLIIEAMAQTAGAI CIQHAKQIKPSVVYFLTIENAKFRKPVVPGDRMEIHVKKVKQRGMIWKFACEAIVDGGKVAEAMISALLSAEEPE
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=144, Percent_Identity=45.1388888888889, Blast_Score=132, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_MESSB (Q11II9)
Other databases:
- EMBL: CP000390 - RefSeq: YP_673951.1 - ProteinModelPortal: Q11II9 - SMR: Q11II9 - STRING: Q11II9 - GeneID: 4181237 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_1390 - NMPDR: fig|266779.1.peg.2202 - eggNOG: COG0764 - HOGENOM: HBG433282 - OMA: NVSANES - PhylomeDB: Q11II9 - ProtClustDB: PRK00006 - BioCyc: MSP266779:MESO_1390-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 17228; Mature: 17096
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: ACT_SITE 58-58
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGVSPAMESLDILNVLRLLPHRYPFLLVDRIVEIDGDNSAIGIKNVTVNEPHFMGHFP CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC ERPVMPGVLIIEAMAQTAGAICIQHAKQIKPSVVYFLTIENAKFRKPVVPGDRMEIHVKK CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH VKQRGMIWKFACEAIVDGGKVAEAMISALLSAEEPE HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADGVSPAMESLDILNVLRLLPHRYPFLLVDRIVEIDGDNSAIGIKNVTVNEPHFMGHFP CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC ERPVMPGVLIIEAMAQTAGAICIQHAKQIKPSVVYFLTIENAKFRKPVVPGDRMEIHVKK CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH VKQRGMIWKFACEAIVDGGKVAEAMISALLSAEEPE HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA