| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is cdsA [H]
Identifier: 110633739
GI number: 110633739
Start: 1478437
End: 1479294
Strand: Direct
Name: cdsA [H]
Synonym: Meso_1386
Alternate gene names: 110633739
Gene position: 1478437-1479294 (Clockwise)
Preceding gene: 110633738
Following gene: 110633740
Centisome position: 33.51
GC content: 61.31
Gene sequence:
>858_bases ATGAGCGAGGCTGCTTCGCCGCTTGGCAGCCCCGGAACGGGCCCGAGCAACCTGACGCTTCGTATTGTTTCTGCCATCAT ACTGGCGCTGCTGGCGCTGGGGCTTACCTATCTGGGCGGGTTTGCATTCCGGCTTTTCGCTTCCGCGCTGGCCGTGCTTG TTTTTTATGAGTGGACTGCCATGAGGCCGGCCGAGAGCCGTATCCACACGGCTGTTTCGTGGGGCGCGCTCGCGGTTTTC CTGCTTGCTTTGCTGGCTGCCGTTTCAGCACCGGCGGCACTTGCAATGCTTCTTATCTGTTTTCTGGTGGCGCTAGTACA TGGCGGCTTTTCCGGCGATGACCGGTGGAGCGCATATGGAATTGCCTATGCCGGAATACCTGCGACCGCGCTGGCTTATC TGCGCGGAGACGATAGCGCGGGTTTGATCGCGATCCTCTTCCTTTACGCCGTTGTCTGGGCCACGGATATCCTCGCCTAT TTCGTTGGGCGAGCTGTTGGAGGACCGAAGCTTGCGCCGTCCATTTCTCCCGGAAAGACCTGGAGCGGCGCTGCGGGCGG CGCGGTCGGAGGCATTCTGGCCGGTGGGCTGGTCGCTTATCTTTCCGGCGCGGCGCTGCCCTTTTGGGCCGTGCTCCTTC TTGCGCTGCTGCTTTCCCTTGTGTCGCAGCTGGGTGATCTTTTCGAATCGATGATCAAGCGTCGCAGCGGCGTGAAGGAT TCTGGCTCCTTCATCCCTGGCCATGGCGGCGTCATGGATCGGGTTGATGGGCTTGTCGCCGCCGCCCTGGTCCTTTATCT GCTGGGCGTCATCTTTTCAGGACACGCGGCACCCGCCGGTCTTTTCTCCCCGCGATAG
Upstream 100 bases:
>100_bases GCCATTGGCCGGACTTCGGTCCGGGCGATCTGGCGGCGGCCATCAGCCTTTTTGAAGAAAGGGACCGCCGCTTCGGCAGT ATCGCTCAAGAAGCGGCCTC
Downstream 100 bases:
>100_bases GAGATATGCCACGGATTTGCCGCCTTTCGCCAGAGAACTGACACAGGGAAAATTCCGGCATCGGCTTTGGGGCTTGTTTT GGGCGACGTCACGGGCACAA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSEAASPLGSPGTGPSNLTLRIVSAIILALLALGLTYLGGFAFRLFASALAVLVFYEWTAMRPAESRIHTAVSWGALAVF LLALLAAVSAPAALAMLLICFLVALVHGGFSGDDRWSAYGIAYAGIPATALAYLRGDDSAGLIAILFLYAVVWATDILAY FVGRAVGGPKLAPSISPGKTWSGAAGGAVGGILAGGLVAYLSGAALPFWAVLLLALLLSLVSQLGDLFESMIKRRSGVKD SGSFIPGHGGVMDRVDGLVAAALVLYLLGVIFSGHAAPAGLFSPR
Sequences:
>Translated_285_residues MSEAASPLGSPGTGPSNLTLRIVSAIILALLALGLTYLGGFAFRLFASALAVLVFYEWTAMRPAESRIHTAVSWGALAVF LLALLAAVSAPAALAMLLICFLVALVHGGFSGDDRWSAYGIAYAGIPATALAYLRGDDSAGLIAILFLYAVVWATDILAY FVGRAVGGPKLAPSISPGKTWSGAAGGAVGGILAGGLVAYLSGAALPFWAVLLLALLLSLVSQLGDLFESMIKRRSGVKD SGSFIPGHGGVMDRVDGLVAAALVLYLLGVIFSGHAAPAGLFSPR >Mature_284_residues SEAASPLGSPGTGPSNLTLRIVSAIILALLALGLTYLGGFAFRLFASALAVLVFYEWTAMRPAESRIHTAVSWGALAVFL LALLAAVSAPAALAMLLICFLVALVHGGFSGDDRWSAYGIAYAGIPATALAYLRGDDSAGLIAILFLYAVVWATDILAYF VGRAVGGPKLAPSISPGKTWSGAAGGAVGGILAGGLVAYLSGAALPFWAVLLLALLLSLVSQLGDLFESMIKRRSGVKDS GSFIPGHGGVMDRVDGLVAAALVLYLLGVIFSGHAAPAGLFSPR
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=126, Percent_Identity=43.6507936507937, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=39.8230088495575, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29077; Mature: 28945
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAASPLGSPGTGPSNLTLRIVSAIILALLALGLTYLGGFAFRLFASALAVLVFYEWTA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRPAESRIHTAVSWGALAVFLLALLAAVSAPAALAMLLICFLVALVHGGFSGDDRWSAYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH IAYAGIPATALAYLRGDDSAGLIAILFLYAVVWATDILAYFVGRAVGGPKLAPSISPGKT HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC WSGAAGGAVGGILAGGLVAYLSGAALPFWAVLLLALLLSLVSQLGDLFESMIKRRSGVKD CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGSFIPGHGGVMDRVDGLVAAALVLYLLGVIFSGHAAPAGLFSPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEAASPLGSPGTGPSNLTLRIVSAIILALLALGLTYLGGFAFRLFASALAVLVFYEWTA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRPAESRIHTAVSWGALAVFLLALLAAVSAPAALAMLLICFLVALVHGGFSGDDRWSAYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH IAYAGIPATALAYLRGDDSAGLIAILFLYAVVWATDILAYFVGRAVGGPKLAPSISPGKT HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC WSGAAGGAVGGILAGGLVAYLSGAALPFWAVLLLALLLSLVSQLGDLFESMIKRRSGVKD CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGSFIPGHGGVMDRVDGLVAAALVLYLLGVIFSGHAAPAGLFSPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA