Click here to switch to the map view.

The map label for this gene is yaeL [C]

Identifier: 110633740

GI number: 110633740

Start: 1479373

End: 1480512

Strand: Direct

Name: yaeL [C]

Synonym: Meso_1387

Alternate gene names: 110633740

Gene position: 1479373-1480512 (Clockwise)

Preceding gene: 110633739

Following gene: 110633741

Centisome position: 33.53

GC content: 62.11

Gene sequence:

>1140_bases
TTGGGCGACGTCACGGGCACAATCTTCGGCTTTGGCAGCTTTCTTGCGGGAACGATCGTGCCGTTCCTGTTCGTGCTGAC
GGTCGTCGTCTTCGTTCACGAGATGGGACATTACCTCGTCGGTCGCTGGTGCGGTATCGGAGTAAGGGCCTTCTCGATCG
GCTTCGGTCCCGAGCTCGTCGGCTTCACCGACCGTCACGGCACGCGATGGAAGCTTTCGGCGATTCCGCTCGGCGGCTAT
GTAAAATTCGTGGGCGATGTAGGGGCCACCAGCGCGCCGGATGCCGAAGGCCTGGAGAAACTCAGCGCCGAGGAGCGGCG
AACAGCCTTTCACCTGCAGCCTATATGGAAGCGGGCGGCGACGGTTTTTGCTGGCCCATTCTTCAACTTCCTTCTGACCG
TCGCGGTCTTTTCGGTCATGTTTTCGCTCTTTGGCCGCTACATTTCGGACCCCATGGTGGCGGAGGTGCGGCCTGATAGC
CCCGCAGCCGTCGCAGGCATCATTCCCGGCGACCGTTTCGTCTCGATCGACGGCAAACCTGTGGAAACATTCGGCGATGT
GCAGCGCATCGTCTCCGGTCGGGCCGGCGATCCTCTCACATTCGTAATGGAGCGGGATGGGCGCCAAATCACCGTCACCG
CCACCCCCGAACTGAGCGAGCAAGCGGACGCGCTCGGCAATCAGATCAAGATCGGCGTCATCGGCGTCATCAACAACGAG
GCGCTGGGGCAGCCGCGCCTTGTCGAATACGGCCCCGTCGAGGCGGTTGGCGCGGGCATTGAGGAGACCGCGGGCGCGAT
TGTCCGGACAGGCCAGTTCCTACAGCGTCTGGTGGCGGGACGGGAGGACCGATGCCAGCTCGGCGGGCCGGTCAAGATCG
CCGACATGGCGGGGAGGGCGGCGAGCCTTGGCTTCGAATGGCTCGTGCAGCTGGCTGCGCTTCTTTCTGTGGGTATCGGG
ATTCTCAATCTTCTGCCAATTCCGCCGCTTGATGGAGGACATCTCCTGTTCTACGCAATAGAGGCGGTGCTTCGCCGGCC
CGTGCCGGAACAGGTGGCAGAGGCGGTTTACCGCGTGGGGATGCTTATGGTGCTGGTCTTTATGGGATTCGTCTTTTGGA
ACGACCTTTTCGGGTGCTAG

Upstream 100 bases:

>100_bases
CGGTCTTTTCTCCCCGCGATAGGAGATATGCCACGGATTTGCCGCCTTTCGCCAGAGAACTGACACAGGGAAAATTCCGG
CATCGGCTTTGGGGCTTGTT

Downstream 100 bases:

>100_bases
AGTCTTTCTCGGTTCAAATTTAGCCATCAAGGCTCTAAGTTCCGACGAATCCGGGTTTGGGGGGCTGTATCGATCGCATT
GTTGAGACGGTGTTTACCAC

Product: peptidase RseP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MGDVTGTIFGFGSFLAGTIVPFLFVLTVVVFVHEMGHYLVGRWCGIGVRAFSIGFGPELVGFTDRHGTRWKLSAIPLGGY
VKFVGDVGATSAPDAEGLEKLSAEERRTAFHLQPIWKRAATVFAGPFFNFLLTVAVFSVMFSLFGRYISDPMVAEVRPDS
PAAVAGIIPGDRFVSIDGKPVETFGDVQRIVSGRAGDPLTFVMERDGRQITVTATPELSEQADALGNQIKIGVIGVINNE
ALGQPRLVEYGPVEAVGAGIEETAGAIVRTGQFLQRLVAGREDRCQLGGPVKIADMAGRAASLGFEWLVQLAALLSVGIG
ILNLLPIPPLDGGHLLFYAIEAVLRRPVPEQVAEAVYRVGMLMVLVFMGFVFWNDLFGC

Sequences:

>Translated_379_residues
MGDVTGTIFGFGSFLAGTIVPFLFVLTVVVFVHEMGHYLVGRWCGIGVRAFSIGFGPELVGFTDRHGTRWKLSAIPLGGY
VKFVGDVGATSAPDAEGLEKLSAEERRTAFHLQPIWKRAATVFAGPFFNFLLTVAVFSVMFSLFGRYISDPMVAEVRPDS
PAAVAGIIPGDRFVSIDGKPVETFGDVQRIVSGRAGDPLTFVMERDGRQITVTATPELSEQADALGNQIKIGVIGVINNE
ALGQPRLVEYGPVEAVGAGIEETAGAIVRTGQFLQRLVAGREDRCQLGGPVKIADMAGRAASLGFEWLVQLAALLSVGIG
ILNLLPIPPLDGGHLLFYAIEAVLRRPVPEQVAEAVYRVGMLMVLVFMGFVFWNDLFGC
>Mature_378_residues
GDVTGTIFGFGSFLAGTIVPFLFVLTVVVFVHEMGHYLVGRWCGIGVRAFSIGFGPELVGFTDRHGTRWKLSAIPLGGYV
KFVGDVGATSAPDAEGLEKLSAEERRTAFHLQPIWKRAATVFAGPFFNFLLTVAVFSVMFSLFGRYISDPMVAEVRPDSP
AAVAGIIPGDRFVSIDGKPVETFGDVQRIVSGRAGDPLTFVMERDGRQITVTATPELSEQADALGNQIKIGVIGVINNEA
LGQPRLVEYGPVEAVGAGIEETAGAIVRTGQFLQRLVAGREDRCQLGGPVKIADMAGRAASLGFEWLVQLAALLSVGIGI
LNLLPIPPLDGGHLLFYAIEAVLRRPVPEQVAEAVYRVGMLMVLVFMGFVFWNDLFGC

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=236, Percent_Identity=33.8983050847458, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 40675; Mature: 40544

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDVTGTIFGFGSFLAGTIVPFLFVLTVVVFVHEMGHYLVGRWCGIGVRAFSIGFGPELV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
GFTDRHGTRWKLSAIPLGGYVKFVGDVGATSAPDAEGLEKLSAEERRTAFHLQPIWKRAA
CEECCCCCEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFAGPFFNFLLTVAVFSVMFSLFGRYISDPMVAEVRPDSPAAVAGIIPGDRFVSIDGKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEEECCCC
VETFGDVQRIVSGRAGDPLTFVMERDGRQITVTATPELSEQADALGNQIKIGVIGVINNE
CHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCEEEEEEEEEECCC
ALGQPRLVEYGPVEAVGAGIEETAGAIVRTGQFLQRLVAGREDRCQLGGPVKIADMAGRA
CCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCHH
ASLGFEWLVQLAALLSVGIGILNLLPIPPLDGGHLLFYAIEAVLRRPVPEQVAEAVYRVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
MLMVLVFMGFVFWNDLFGC
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDVTGTIFGFGSFLAGTIVPFLFVLTVVVFVHEMGHYLVGRWCGIGVRAFSIGFGPELV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
GFTDRHGTRWKLSAIPLGGYVKFVGDVGATSAPDAEGLEKLSAEERRTAFHLQPIWKRAA
CEECCCCCEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFAGPFFNFLLTVAVFSVMFSLFGRYISDPMVAEVRPDSPAAVAGIIPGDRFVSIDGKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEEECCCC
VETFGDVQRIVSGRAGDPLTFVMERDGRQITVTATPELSEQADALGNQIKIGVIGVINNE
CHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCEEEEEEEEEECCC
ALGQPRLVEYGPVEAVGAGIEETAGAIVRTGQFLQRLVAGREDRCQLGGPVKIADMAGRA
CCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCHH
ASLGFEWLVQLAALLSVGIGILNLLPIPPLDGGHLLFYAIEAVLRRPVPEQVAEAVYRVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
MLMVLVFMGFVFWNDLFGC
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]