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The map label for this gene is clpS1 [H]

Identifier: 110633725

GI number: 110633725

Start: 1465173

End: 1465574

Strand: Direct

Name: clpS1 [H]

Synonym: Meso_1372

Alternate gene names: 110633725

Gene position: 1465173-1465574 (Clockwise)

Preceding gene: 110633723

Following gene: 110633726

Centisome position: 33.21

GC content: 55.47

Gene sequence:

>402_bases
ATGGGGAGCTATGACGGAACGCATGGGAATATTGGGATCGGCGAGAGAAAAATGCCAGGCGACGCTTTGCGGATGAGCCG
TGGGGACGACGAAGGCAACAGCACAGGGCGCGGCACGGCTGTCATCACCCGTACCAGAACCAAGACCAAAAAGCCGAGTC
TCTATCGCGTGCTGCTGTTGAACGACGATTACACGCCCATGGAATTCGTCGTTCATGTTCTGGAGCGTTTCTTCCAGAAA
GACCGGGAGGCGGCGACAATGATTATGCTGCATGTCCACAATCATGGGGTGGGCGAGTGCGGCATATACACGTTCGAAGT
GGCCGAGACAAAGGTGTCCCAGGTCATGGATTTTGCCCGTCAGCACCAGCATCCGCTGCAATGCGTGATGGAGAAGAAAT
GA

Upstream 100 bases:

>100_bases
CTGCATGTGAAAAATTTGAGCGGGGCGGGAGTGCAATGCGTATTGTCAGCACGCCAGAAGGGCTTAAAATCACCAATAAG
GTGCCTACATGTCATAGCTC

Downstream 100 bases:

>100_bases
GGTTTTGAATGCCGGCTTTCTCGCAAGGCCTGGAACGCGCGCTACATCAAGCGCTGACCTATGCCAATGAGCGCCATCAT
GAATATGCGACGCTCGAGCA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MGSYDGTHGNIGIGERKMPGDALRMSRGDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQK
DREAATMIMLHVHNHGVGECGIYTFEVAETKVSQVMDFARQHQHPLQCVMEKK

Sequences:

>Translated_133_residues
MGSYDGTHGNIGIGERKMPGDALRMSRGDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQK
DREAATMIMLHVHNHGVGECGIYTFEVAETKVSQVMDFARQHQHPLQCVMEKK
>Mature_132_residues
GSYDGTHGNIGIGERKMPGDALRMSRGDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQKD
REAATMIMLHVHNHGVGECGIYTFEVAETKVSQVMDFARQHQHPLQCVMEKK

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=89, Percent_Identity=55.0561797752809, Blast_Score=112, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 15055; Mature: 14924

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYDGTHGNIGIGERKMPGDALRMSRGDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLL
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE
NDDYTPMEFVVHVLERFFQKDREAATMIMLHVHNHGVGECGIYTFEVAETKVSQVMDFAR
CCCCCHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHH
QHQHPLQCVMEKK
HCCCCHHHHCCCC
>Mature Secondary Structure 
GSYDGTHGNIGIGERKMPGDALRMSRGDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE
NDDYTPMEFVVHVLERFFQKDREAATMIMLHVHNHGVGECGIYTFEVAETKVSQVMDFAR
CCCCCHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHH
QHQHPLQCVMEKK
HCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]