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The map label for this gene is ycbC [H]

Identifier: 110633719

GI number: 110633719

Start: 1458653

End: 1459453

Strand: Direct

Name: ycbC [H]

Synonym: Meso_1366

Alternate gene names: 110633719

Gene position: 1458653-1459453 (Clockwise)

Preceding gene: 110633718

Following gene: 110633720

Centisome position: 33.06

GC content: 62.17

Gene sequence:

>801_bases
ATGTTCCACCTGGCCTCCGCCATTTTTTGGGCGTTGGTGCAACCGTTCAATCTTGTGGGCCTGCTGATCGCGGCAGCGCT
TATCGCCGCGATTTTTCGCTGGCGGAAGCTTTCAATCACCTTCGGCGTCTTCGCTTTTCTTGTTGTCGCTCTGGCCGGCT
GGACCACCTTCGGCGCAATGCTTCTCCATCCATTGGAGAGCAGGTTCGCACGTCCCGACCCGGCGCCGCAGCATGTGGAC
GGGATCATCGTTCTGGGCGGCGGCTTCGAAGGCGCGGTCAACCTTGCGCGTGGCGGCTATGAGCTTAACGACAGCGGTGA
TCGCTTTGTCGAGGCAGCCATTCTCGCGCGGCGATATCCCGAGGCGCGGCTTATCGTTTCCGGCGGTTCCGGATCGGTCT
TCCTGCCCGGAGAGGGAGACGCGGACACCGCGCCTCGGCTGTTGACCGCCCTGGGCGTGGCGCCCGAGCGCATCGAACTC
GATAACCGGTCGCGGGACACGTTCGAAAACGCAAGGTTTTCCATGTCCATGGCCGAACCCGGCCCTGATGAGACATGGCT
GCTGGTCACTTCTGCCTTCCATATGCCTCGCGCGGTGGGCGCTTTCCGGCAAGCGGGCTTTCCCATCCTGCCATGGCCGG
CAGACTACAAAACCACCGGTCGCGAGAAACCGGGGCTGACGGATGACAACGTGCTCGATTCGCTGCGCAACACCAGCATC
GGCATTCGGGAATGGGTAGGCCTGCTTGCCTATAGGATGGTCGGGCGGAGCGACAGCATTCTGCCAACAAGAGCGCCTTA
G

Upstream 100 bases:

>100_bases
CGGGTAAATTCGAGCCGAAGCGCTGGTGGTAATTGCGCCCGAGGTGACGCTGGGGCGTACTCTCGAGCACGATCTTCGTG
ATTCGGCTTGAGGGCGAAAT

Downstream 100 bases:

>100_bases
ATCCTGCCACATTTCAGCCTTCATTGTTGAAAAGTCACTAACCGCATTTGTTGTATAAGCTGTTGAATTCCCAGCGATCG
CGATTATATTTTGATCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MFHLASAIFWALVQPFNLVGLLIAAALIAAIFRWRKLSITFGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQHVD
GIIVLGGGFEGAVNLARGGYELNDSGDRFVEAAILARRYPEARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIEL
DNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSI
GIREWVGLLAYRMVGRSDSILPTRAP

Sequences:

>Translated_266_residues
MFHLASAIFWALVQPFNLVGLLIAAALIAAIFRWRKLSITFGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQHVD
GIIVLGGGFEGAVNLARGGYELNDSGDRFVEAAILARRYPEARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIEL
DNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSI
GIREWVGLLAYRMVGRSDSILPTRAP
>Mature_266_residues
MFHLASAIFWALVQPFNLVGLLIAAALIAAIFRWRKLSITFGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQHVD
GIIVLGGGFEGAVNLARGGYELNDSGDRFVEAAILARRYPEARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIEL
DNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSI
GIREWVGLLAYRMVGRSDSILPTRAP

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=155, Percent_Identity=35.4838709677419, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28895; Mature: 28895

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHLASAIFWALVQPFNLVGLLIAAALIAAIFRWRKLSITFGVFAFLVVALAGWTTFGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHPLESRFARPDPAPQHVDGIIVLGGGFEGAVNLARGGYELNDSGDRFVEAAILARRYP
HHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHCCC
EARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIELDNRSRDTFENARFSMSMAEP
CCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCHHEECCCCCCHHHHHHHEEEEECCC
GPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSI
CCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
GIREWVGLLAYRMVGRSDSILPTRAP
CHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFHLASAIFWALVQPFNLVGLLIAAALIAAIFRWRKLSITFGVFAFLVVALAGWTTFGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHPLESRFARPDPAPQHVDGIIVLGGGFEGAVNLARGGYELNDSGDRFVEAAILARRYP
HHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHCCC
EARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIELDNRSRDTFENARFSMSMAEP
CCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCHHEECCCCCCHHHHHHHEEEEECCC
GPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSI
CCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
GIREWVGLLAYRMVGRSDSILPTRAP
CHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]