| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110633715
Identifier: 110633715
GI number: 110633715
Start: 1455533
End: 1456237
Strand: Direct
Name: 110633715
Synonym: Meso_1362
Alternate gene names: NA
Gene position: 1455533-1456237 (Clockwise)
Preceding gene: 110633713
Following gene: 110633716
Centisome position: 32.99
GC content: 60.43
Gene sequence:
>705_bases ATGAAAATAACCTGGTATGGCCATTCCGCTTTCAGGATTGAGGCGGGCGGCGCCAAAATCCTCATCGATCCTTTCCTTTC CGGCAATCCCACTTGGAAAGAGGGCTGGGAAGGACCCGCCGAGGGCGTCACGCACGTTCTTCTGACCCACGGCCACGGCG ACCACTTGGGAGACACGCTGGACATCCTGAAGAAGACAGGAGCCATGCTGGTCGCAAATGCCGAGATCAGCAGCTATTAC GGCGCTCAAGGCGTTGAGGGCAGCAGGATCAACCCCGGCAATCACGGCGGCACTGTGGATTGCGGCGGGTTCACCACAAC CTTCGTGAACGCGCTGCACTCGTCCTCCTTCACCAAGGACGGCAGCAACATTTATCTCGGCAATCCTCACGGCCTCGTGC TGCATTTCCCGAGCGACAAGACCGTCTATCACATGGGGGATACCGATATTTTCGGCGATATGGCCCTCATCGAGGAGCTC CACCAGCCGCAGATCGGCCTTGTGCCCATCGGCGACCGCTACACGATGGGCGGCGCCGTCGCGGCGCTCGCCTGCCGCCG CTTCTTCCGCTTCGAGGCTGTCATCCCCTGCCACTATGGGACCTTTCCGATCATCGATCAGACCGCCGAGAAGTTCATCG AGGGCATGGAAGGCGCTGAGACGAAGGTGTTGACGCCGCCCCCCGGCCAGGAGGTTGATCTATAG
Upstream 100 bases:
>100_bases TTCCAGTTCCTCAATGGAAACAACGCTCACGCCGGTATCCCTGATTTGACACGATCTCTTCCCGTTTTATCCTTTGCGCA AACCATCGAGGAGTCCCGGC
Downstream 100 bases:
>100_bases CAGAGCGAATGCCGCGAAGCTGTTGCGCATGGCGCCGGGCGCGACTATAGCCCTGTGCCAAGGATTTCCCGTGCAAGGAA GAAGGCATGTCCGTCGACAT
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKITWYGHSAFRIEAGGAKILIDPFLSGNPTWKEGWEGPAEGVTHVLLTHGHGDHLGDTLDILKKTGAMLVANAEISSYY GAQGVEGSRINPGNHGGTVDCGGFTTTFVNALHSSSFTKDGSNIYLGNPHGLVLHFPSDKTVYHMGDTDIFGDMALIEEL HQPQIGLVPIGDRYTMGGAVAALACRRFFRFEAVIPCHYGTFPIIDQTAEKFIEGMEGAETKVLTPPPGQEVDL
Sequences:
>Translated_234_residues MKITWYGHSAFRIEAGGAKILIDPFLSGNPTWKEGWEGPAEGVTHVLLTHGHGDHLGDTLDILKKTGAMLVANAEISSYY GAQGVEGSRINPGNHGGTVDCGGFTTTFVNALHSSSFTKDGSNIYLGNPHGLVLHFPSDKTVYHMGDTDIFGDMALIEEL HQPQIGLVPIGDRYTMGGAVAALACRRFFRFEAVIPCHYGTFPIIDQTAEKFIEGMEGAETKVLTPPPGQEVDL >Mature_234_residues MKITWYGHSAFRIEAGGAKILIDPFLSGNPTWKEGWEGPAEGVTHVLLTHGHGDHLGDTLDILKKTGAMLVANAEISSYY GAQGVEGSRINPGNHGGTVDCGGFTTTFVNALHSSSFTKDGSNIYLGNPHGLVLHFPSDKTVYHMGDTDIFGDMALIEEL HQPQIGLVPIGDRYTMGGAVAALACRRFFRFEAVIPCHYGTFPIIDQTAEKFIEGMEGAETKVLTPPPGQEVDL
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1362_MESSB (Q11IL7)
Other databases:
- EMBL: CP000390 - RefSeq: YP_673923.1 - ProteinModelPortal: Q11IL7 - STRING: Q11IL7 - GeneID: 4181557 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_1362 - NMPDR: fig|266779.1.peg.2230 - eggNOG: COG2220 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: PRK00685 - BioCyc: MSP266779:MESO_1362-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 25185; Mature: 25185
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITWYGHSAFRIEAGGAKILIDPFLSGNPTWKEGWEGPAEGVTHVLLTHGHGDHLGDTL CEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCHHHH DILKKTGAMLVANAEISSYYGAQGVEGSRINPGNHGGTVDCGGFTTTFVNALHSSSFTKD HHHHHCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCC GSNIYLGNPHGLVLHFPSDKTVYHMGDTDIFGDMALIEELHQPQIGLVPIGDRYTMGGAV CCEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHH AALACRRFFRFEAVIPCHYGTFPIIDQTAEKFIEGMEGAETKVLTPPPGQEVDL HHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKITWYGHSAFRIEAGGAKILIDPFLSGNPTWKEGWEGPAEGVTHVLLTHGHGDHLGDTL CEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCHHHH DILKKTGAMLVANAEISSYYGAQGVEGSRINPGNHGGTVDCGGFTTTFVNALHSSSFTKD HHHHHCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCC GSNIYLGNPHGLVLHFPSDKTVYHMGDTDIFGDMALIEELHQPQIGLVPIGDRYTMGGAV CCEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHH AALACRRFFRFEAVIPCHYGTFPIIDQTAEKFIEGMEGAETKVLTPPPGQEVDL HHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA