| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633636
Identifier: 110633636
GI number: 110633636
Start: 1375795
End: 1376364
Strand: Reverse
Name: 110633636
Synonym: Meso_1283
Alternate gene names: NA
Gene position: 1376364-1375795 (Counterclockwise)
Preceding gene: 110633638
Following gene: 110633634
Centisome position: 31.19
GC content: 61.05
Gene sequence:
>570_bases ATGCTGGCTACATGCGCGACCATGAAATCAAAGGACGCAGACATCCTTATCATCCCCGGCTATACGAATTCCGGGCCCGA TCACTGGCAGACGCGCTGGCAAGCGCGGCTGACGACGGCCCGCCGGGTGGAGCAGGCGGAATGGTCAAAGCCCGTTCGGG ACGACTGGGTGAACAAGGTCGTGGAAGCCGTGAACGAGGCGCGAAAGCCGATCGTTCTGGTCGCCCATTCGCTCGGGATA GCCTCGGTTGTGCATGGCATCCCGCATTTCCGCAAGAAGATCGCGGGCGCCTTCTTCGTCGCTCCGCCCGACGTTGCCAA CCCAAGCATCAGGCCGAAGCACCTGATGACATTCGGCCCCTACCCTAGGGATCCCCTGCCTTTTCCATCAATCGTGGTGG CTAGCCGCAACGACCATTTCGGCAGTTTCGAACAGGCGGAAGACATCGCGGCAGCGTGGGGCTCGCTCTTTCTCGATGCC GGTGAAGCCGGGCATATCAATGCGGAAGCGGGTTTTGGGCCGTGGCCGGAAGGAAGCCTTGCTTTCGCTCGCTTCCTTTC GCAACTCTGA
Upstream 100 bases:
>100_bases TGGATGCATGTGATAGCGCATTCCCCGGCAAACAAGCTCTGAAAAGAGAACGCCGTGTTCAACAATCACAACCATACCCT ACGGGTTGCATGGAGAGATC
Downstream 100 bases:
>100_bases CCGCTAGACGGAAAACCGCAGGCGGCGCCCCGCGCCTACTCGCTTTTCACCTGGGCGATGGCTTGGCCAAGCAGATCCAC CATCTTGCCGCGAATGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLATCATMKSKDADILIIPGYTNSGPDHWQTRWQARLTTARRVEQAEWSKPVRDDWVNKVVEAVNEARKPIVLVAHSLGI ASVVHGIPHFRKKIAGAFFVAPPDVANPSIRPKHLMTFGPYPRDPLPFPSIVVASRNDHFGSFEQAEDIAAAWGSLFLDA GEAGHINAEAGFGPWPEGSLAFARFLSQL
Sequences:
>Translated_189_residues MLATCATMKSKDADILIIPGYTNSGPDHWQTRWQARLTTARRVEQAEWSKPVRDDWVNKVVEAVNEARKPIVLVAHSLGI ASVVHGIPHFRKKIAGAFFVAPPDVANPSIRPKHLMTFGPYPRDPLPFPSIVVASRNDHFGSFEQAEDIAAAWGSLFLDA GEAGHINAEAGFGPWPEGSLAFARFLSQL >Mature_189_residues MLATCATMKSKDADILIIPGYTNSGPDHWQTRWQARLTTARRVEQAEWSKPVRDDWVNKVVEAVNEARKPIVLVAHSLGI ASVVHGIPHFRKKIAGAFFVAPPDVANPSIRPKHLMTFGPYPRDPLPFPSIVVASRNDHFGSFEQAEDIAAAWGSLFLDA GEAGHINAEAGFGPWPEGSLAFARFLSQL
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20735; Mature: 20735
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATCATMKSKDADILIIPGYTNSGPDHWQTRWQARLTTARRVEQAEWSKPVRDDWVNKV CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VEAVNEARKPIVLVAHSLGIASVVHGIPHFRKKIAGAFFVAPPDVANPSIRPKHLMTFGP HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEECC YPRDPLPFPSIVVASRNDHFGSFEQAEDIAAAWGSLFLDAGEAGHINAEAGFGPWPEGSL CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH AFARFLSQL HHHHHHHHC >Mature Secondary Structure MLATCATMKSKDADILIIPGYTNSGPDHWQTRWQARLTTARRVEQAEWSKPVRDDWVNKV CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VEAVNEARKPIVLVAHSLGIASVVHGIPHFRKKIAGAFFVAPPDVANPSIRPKHLMTFGP HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEECC YPRDPLPFPSIVVASRNDHFGSFEQAEDIAAAWGSLFLDAGEAGHINAEAGFGPWPEGSL CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH AFARFLSQL HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA