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The map label for this gene is bioY [H]

Identifier: 110633627

GI number: 110633627

Start: 1369348

End: 1369938

Strand: Direct

Name: bioY [H]

Synonym: Meso_1274

Alternate gene names: 110633627

Gene position: 1369348-1369938 (Clockwise)

Preceding gene: 110633624

Following gene: 110633628

Centisome position: 31.03

GC content: 60.91

Gene sequence:

>591_bases
ATGTCAAATCTGTCGAAATCAGCGTCAAAAACCGCATTAAGCCCACTCGGCCGGCAAAATCGGTCGTTTGCCTTGCAAGC
TGCGGCGGTCGCCTTCGGGTCGGCCTTTCTGGCGCTTGCATCGTATATCGAGGTGCCGATGTATCCCGTGCCGATGACCA
TGCAGACCTTTGCGGTCGCATTTTTGGGCGCGATCTATGGATGGCGGCTGGGGGGCATCACCGTCCTGGCATGGCTCGTC
GAAGGGGCATTAGGGTTGCCCGTGCTCGCCGGCGGTGGCGGCGGCTTGCTGCATTTTTCCGGACCGACCGCCGGTTATCT
TTTCGCCTTTCCCCTGATGGCAATGCTTACGGGCTGGCTTGCCGAGCATGGCTGGAACGGCAGCCGCGTCTTTCTCGCCT
TCCTGTCCATGCTGCTCGCCAACTGCCTTTGCCTTTTGCTTGGCGCGGCGTGGCTTTCAGGCATGATCGGCGTCGAACAG
GCGATCATCCACGGGGTGACCCCATTCATTCTCGGCGCTGTTTTGAAATCCGCGCTGGGCGCTGCGGCACTCAAGGCGCT
CCAACGCGGCAAGGTGTTGCCTTCGGCGTGA

Upstream 100 bases:

>100_bases
CACGACAGTCAGCGGCGTAGCGCGCGCGGCTGGTTGCGGAATTGCCCGCACAGCGGCAAACTCCCGTGCACTCAGTTCGA
TTCCCACCGATGGTCGCTTC

Downstream 100 bases:

>100_bases
CCATCCGGCTCCGAGCACATCACCTGCTGTGCCTGCTGACCTATGTCGGCAAAGGTTACAGCCCCGCCTTCACCGCGAAT
TACGACGTGATTGCGGGGCG

Product: BioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSNLSKSASKTALSPLGRQNRSFALQAAAVAFGSAFLALASYIEVPMYPVPMTMQTFAVAFLGAIYGWRLGGITVLAWLV
EGALGLPVLAGGGGGLLHFSGPTAGYLFAFPLMAMLTGWLAEHGWNGSRVFLAFLSMLLANCLCLLLGAAWLSGMIGVEQ
AIIHGVTPFILGAVLKSALGAAALKALQRGKVLPSA

Sequences:

>Translated_196_residues
MSNLSKSASKTALSPLGRQNRSFALQAAAVAFGSAFLALASYIEVPMYPVPMTMQTFAVAFLGAIYGWRLGGITVLAWLV
EGALGLPVLAGGGGGLLHFSGPTAGYLFAFPLMAMLTGWLAEHGWNGSRVFLAFLSMLLANCLCLLLGAAWLSGMIGVEQ
AIIHGVTPFILGAVLKSALGAAALKALQRGKVLPSA
>Mature_195_residues
SNLSKSASKTALSPLGRQNRSFALQAAAVAFGSAFLALASYIEVPMYPVPMTMQTFAVAFLGAIYGWRLGGITVLAWLVE
GALGLPVLAGGGGGLLHFSGPTAGYLFAFPLMAMLTGWLAEHGWNGSRVFLAFLSMLLANCLCLLLGAAWLSGMIGVEQA
IIHGVTPFILGAVLKSALGAAALKALQRGKVLPSA

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 20254; Mature: 20123

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSKSASKTALSPLGRQNRSFALQAAAVAFGSAFLALASYIEVPMYPVPMTMQTFAVA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FLGAIYGWRLGGITVLAWLVEGALGLPVLAGGGGGLLHFSGPTAGYLFAFPLMAMLTGWL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH
AEHGWNGSRVFLAFLSMLLANCLCLLLGAAWLSGMIGVEQAIIHGVTPFILGAVLKSALG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAALKALQRGKVLPSA
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNLSKSASKTALSPLGRQNRSFALQAAAVAFGSAFLALASYIEVPMYPVPMTMQTFAVA
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FLGAIYGWRLGGITVLAWLVEGALGLPVLAGGGGGLLHFSGPTAGYLFAFPLMAMLTGWL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH
AEHGWNGSRVFLAFLSMLLANCLCLLLGAAWLSGMIGVEQAIIHGVTPFILGAVLKSALG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAALKALQRGKVLPSA
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]