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The map label for this gene is petE [H]

Identifier: 110633597

GI number: 110633597

Start: 1340467

End: 1340988

Strand: Reverse

Name: petE [H]

Synonym: Meso_1244

Alternate gene names: 110633597

Gene position: 1340988-1340467 (Counterclockwise)

Preceding gene: 110633598

Following gene: 110633596

Centisome position: 30.39

GC content: 63.22

Gene sequence:

>522_bases
ATGATCCTGACGCGCAGGCGCGTGCTGGAGGTTGGCGGGGGTATCCTCGCCGCCCTCCTGGCCAGGCCAGCGGCGGCCTG
GAGCGCTTCGGTCGAGATCGCCATGCAGGGGAGGCCCGACGGCTCGCATGTCTGGTTCGATCCCATCGGCCTGCACATCG
AGCCCGGCCAGACGGTACGCTGGATCAATCGCGACCGGGGCAATTCACATACGGTCACGTCCTACCACCCGGAAATATTC
GATCGCCCCCGGCGCATCCCAGCCAAAGCCAAGGCATGGGATTCGGGTTATCTTCTGCCGGAGGAGACTTTTTCCGTCCG
TTTCGACGAAGAAGGCGTCTACGACTATTATTGCGTTCCGCACGAGCATGCAGGCATGGTGGGCCGGATCGTGGTCGGAA
AGCCGCCTGCCGTGGAAGCAGCTGCGGAAACCGCGGGTTTGACGCCTTTGCCGGAAGCGGCGCTAAATGGCTTTCCGCAG
GTCGAGGAGATCATCGACAACGGCATTGTGCGGCGGGAGTGA

Upstream 100 bases:

>100_bases
TCGACGTCTACTATAATGCCGGCCATCCGGGCGTCGAAAAACCTCATGTCCACGTTGTGCTGTGGCACGTCCCCGTGGCA
GACGAAGCGAAGGTGGCGCA

Downstream 100 bases:

>100_bases
TAGGGAATGAGAGGTCTCGACATAGAAATGACGATGGCTCATCCCAAGCTTGATCTTGAACGGTTGAGCGATGAAGAGCT
TGTTCATCTCGCCAGACAGG

Product: blue (type1) copper domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MILTRRRVLEVGGGILAALLARPAAAWSASVEIAMQGRPDGSHVWFDPIGLHIEPGQTVRWINRDRGNSHTVTSYHPEIF
DRPRRIPAKAKAWDSGYLLPEETFSVRFDEEGVYDYYCVPHEHAGMVGRIVVGKPPAVEAAAETAGLTPLPEAALNGFPQ
VEEIIDNGIVRRE

Sequences:

>Translated_173_residues
MILTRRRVLEVGGGILAALLARPAAAWSASVEIAMQGRPDGSHVWFDPIGLHIEPGQTVRWINRDRGNSHTVTSYHPEIF
DRPRRIPAKAKAWDSGYLLPEETFSVRFDEEGVYDYYCVPHEHAGMVGRIVVGKPPAVEAAAETAGLTPLPEAALNGFPQ
VEEIIDNGIVRRE
>Mature_173_residues
MILTRRRVLEVGGGILAALLARPAAAWSASVEIAMQGRPDGSHVWFDPIGLHIEPGQTVRWINRDRGNSHTVTSYHPEIF
DRPRRIPAKAKAWDSGYLLPEETFSVRFDEEGVYDYYCVPHEHAGMVGRIVVGKPPAVEAAAETAGLTPLPEAALNGFPQ
VEEIIDNGIVRRE

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I [H]

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387 [H]

Pfam domain/function: PF00127 Copper-bind [H]

EC number: NA

Molecular weight: Translated: 19090; Mature: 19090

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTRRRVLEVGGGILAALLARPAAAWSASVEIAMQGRPDGSHVWFDPIGLHIEPGQTVR
CCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCCCEEE
WINRDRGNSHTVTSYHPEIFDRPRRIPAKAKAWDSGYLLPEETFSVRFDEEGVYDYYCVP
EEECCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECC
HEHAGMVGRIVVGKPPAVEAAAETAGLTPLPEAALNGFPQVEEIIDNGIVRRE
CCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MILTRRRVLEVGGGILAALLARPAAAWSASVEIAMQGRPDGSHVWFDPIGLHIEPGQTVR
CCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCCCEEE
WINRDRGNSHTVTSYHPEIFDRPRRIPAKAKAWDSGYLLPEETFSVRFDEEGVYDYYCVP
EEECCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECC
HEHAGMVGRIVVGKPPAVEAAAETAGLTPLPEAALNGFPQVEEIIDNGIVRRE
CCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759846; 10320332 [H]