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The map label for this gene is aapJ [H]

Identifier: 110633466

GI number: 110633466

Start: 1215897

End: 1216919

Strand: Direct

Name: aapJ [H]

Synonym: Meso_1113

Alternate gene names: 110633466

Gene position: 1215897-1216919 (Clockwise)

Preceding gene: 110633464

Following gene: 110633467

Centisome position: 27.56

GC content: 56.89

Gene sequence:

>1023_bases
ATGAACAATCTCATCAAGGCGCTGCTTGGCACAGTCGTAATCGCCTCCGCCGTCATTCCGGCCTCAGCAGCAACTCTGGA
CGACGTGAAGAACAGGGGTGCGCTGCGTTGCGGCGTCAATACCGGCCTACCGGGGTTCGCATTTCAGAACGATCAGGGAG
ATTGGCAGGGCCTGGATGTCGATTACTGCAAGGCCGTTGCTGCTGCGGTATTCGAAGGCGATGCGACCAAAGTTCAATAT
TCGCCCCTGTCAGCAGTGCAGCGCTTTCCTGCCCTGCAGAATAACGAGGTGGATCTTCTTGCCCGCAACACGACCTGGAC
GATGAACCGGGACACGGCGCTGGGTCTGAATTTCGTAGGCGTGAACTACTATGATGGGCAGGGCTTCATGGTGCGGCAGG
ACCTGAACGTGACCTCCGCCCTGCAGCTTTCTGGCGCTACCGTATGCGTTCAAAGCGGCACGACGACCGAGTTGAATCTG
ACCGACTATTTTCGCGCTAACAATATGGAGTTCAATCCGGTCGTCATCGAACAGCAGTCGGATGTAAACTCCGCTTACGA
GCAGGGACGCTGTGATGTGTTGACGACCGACGCATCGGGCCTCTATGCCAGCCGCCTCGAACTTTCCAATCCCGACGACC
ACGTCGTGCTGCCTGAGATCATTTCCAAGGAGCCGCTTGGGCCGGTCGTACGCCAGGGTGACGAGCAGTGGTTCGACATT
GTGAAATGGGTCCACTTCGGCCTGATCAATGCCGAGGAACTGGGGGTGACCCAGGATAATGTCGAGGACATGGCCGCAAA
TTCCGAGAACCCGGACGTTCGCCGGCTTTTGGGAGCTGATGGCACTTTTGGTCAGGATGTTGGTCTTACGAATGACTGGA
TGGTCAACGTAATCAAGGCCGTGGGCAATTATGGCGAGATATTCGACCGCAATGTCGGGCCAAATACGCCGCTCAAGATT
CAGCGGGGCCTGAATGCATTGTGGACCAAAGGCGGCTTGCAATACGCGCCACCGGTTCGCTGA

Upstream 100 bases:

>100_bases
GCGTGCTTGGGAGAAGAAGCCGGTGCTTGCGAGGGCAGAACCTCGGCTTCTGCACGCAATTGGGGATAAGCCCTGCCTGC
TAAGAAAAGGGTCAACAATC

Downstream 100 bases:

>100_bases
GCAGATGAGCACAAGCCGCGGCGCGGCTGAGTTCGCGGCTTCCCTGTAAGCCAAAGCGTGAGCCGCCGTTTCTTTTGGAT
GGCTCACGACTCGGCGTAGG

Product: cationic amino acid ABC transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNNLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDYCKAVAAAVFEGDATKVQY
SPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVNYYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNL
TDYFRANNMEFNPVVIEQQSDVNSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDI
VKWVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGTFGQDVGLTNDWMVNVIKAVGNYGEIFDRNVGPNTPLKI
QRGLNALWTKGGLQYAPPVR

Sequences:

>Translated_340_residues
MNNLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDYCKAVAAAVFEGDATKVQY
SPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVNYYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNL
TDYFRANNMEFNPVVIEQQSDVNSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDI
VKWVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGTFGQDVGLTNDWMVNVIKAVGNYGEIFDRNVGPNTPLKI
QRGLNALWTKGGLQYAPPVR
>Mature_340_residues
MNNLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDYCKAVAAAVFEGDATKVQY
SPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVNYYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNL
TDYFRANNMEFNPVVIEQQSDVNSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDI
VKWVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGTFGQDVGLTNDWMVNVIKAVGNYGEIFDRNVGPNTPLKI
QRGLNALWTKGGLQYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=217, Percent_Identity=23.5023041474654, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36993; Mature: 36993

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDV
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCCCCH
DYCKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVG
HHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCEEEEEECCEEEECCCCEEEEEEEE
VNYYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQS
EEEECCCCEEEEECCCCHHEEEECCCEEEEECCCCEEEEHHHHHCCCCCCCCCEEEECCC
DVNSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDI
CHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHH
VKWVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGTFGQDVGLTNDWMVNVIKA
HHHHHHCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR
HCCHHHHHCCCCCCCCCEEHHHCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNNLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDV
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCCCCH
DYCKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVG
HHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCEEEEEECCEEEECCCCEEEEEEEE
VNYYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQS
EEEECCCCEEEEECCCCHHEEEECCCEEEEECCCCEEEEHHHHHCCCCCCCCCEEEECCC
DVNSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDI
CHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHH
VKWVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGTFGQDVGLTNDWMVNVIKA
HHHHHHCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR
HCCHHHHHCCCCCCCCCEEHHHCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]