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The map label for this gene is yurM [H]

Identifier: 110633450

GI number: 110633450

Start: 1202132

End: 1202965

Strand: Direct

Name: yurM [H]

Synonym: Meso_1096

Alternate gene names: 110633450

Gene position: 1202132-1202965 (Clockwise)

Preceding gene: 110633449

Following gene: 110633451

Centisome position: 27.24

GC content: 59.59

Gene sequence:

>834_bases
ATGAACATTTCCGAAAGCCGCCTCACCTTCGTGATCGTCTACATCACGCTGTCGCTGCTGCTCGTCATCACGCTGTTTCC
GATCGCGCTGACGGTGCTCAACGCGCTGAAGCCTTCTGCCGAGATCGTCCAGAACCCGCTGGCGCTGCCATCGATCATCC
GCTGGGATAACTTTACCCGCGCCTGGACGGACGCGAATTTCGGCACGACGCTCGTCAATTCGGCCGTGCTCACGGGCCTG
ACGATTATTCTCGTCTGCACCACGGGCTCGCTGACTGGCTATGTGCTGGCACGCCAGAAGATCAAGCGCTGGAAGATCCT
GACCTTCTATCTTCTGGCGAGCACCACCGCGCCAATCCAGCTGTTCCTCTTTCCGCTCTACTTCGGCTTTGCCCGCTTCG
GGCTGGTCAACAATCCGGTTGCCGTTGCCTTCATCTACACGGCGGTCTATTCGCCCTTCGCGATCATGCTGCTGCGCACC
TATTTCCTCGCCGTTCCGAAGGAGCTGGAGGAATCCGCACTAATCGACGGGGCCACGCATTGGCAGGTCTTCCGCCGGGT
CTTCCTGCCGATCGTCTCGCCCGGAATTCTCACCGTCGCGCTGATCGTAGGCCTTAATGCCTGGAACGAATTCCTGATCG
CCACGACCTTCCTTCAGGGGCAGGACAGGCTCACCGCCGTGGTCTCCTTCTTTCTGCTCTCCGGCCAATACTCGTCCGAC
TGGGGTGAGATCATGGCCGCTGCGCTCATCATCATTCTTCCCATCGTAATCCTCTTCGTCCTGCTGCAGCGTCACTTCAT
CGAGGGAATGGCCGGCGGCTCGGTGAAGGGCTGA

Upstream 100 bases:

>100_bases
TGGCGGTCGGAAAGGCGGCAGCGATCTCCGTCGTCATCAGCCTGTTCGGTCTGGCGGCCACCATCTTCTATATCCGCGCC
CAGGCGACGGAGTTCGAAAA

Downstream 100 bases:

>100_bases
CAAGGAGTTTTGCATGTCCATTCCCGCAGATTATACGAACCGCGTCTATGCAGGCGTTCTCGGCAAGCTGATCGGCGTCT
ATCTCGGCCGCCCGTTCGAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNISESRLTFVIVYITLSLLLVITLFPIALTVLNALKPSAEIVQNPLALPSIIRWDNFTRAWTDANFGTTLVNSAVLTGL
TIILVCTTGSLTGYVLARQKIKRWKILTFYLLASTTAPIQLFLFPLYFGFARFGLVNNPVAVAFIYTAVYSPFAIMLLRT
YFLAVPKELEESALIDGATHWQVFRRVFLPIVSPGILTVALIVGLNAWNEFLIATTFLQGQDRLTAVVSFFLLSGQYSSD
WGEIMAAALIIILPIVILFVLLQRHFIEGMAGGSVKG

Sequences:

>Translated_277_residues
MNISESRLTFVIVYITLSLLLVITLFPIALTVLNALKPSAEIVQNPLALPSIIRWDNFTRAWTDANFGTTLVNSAVLTGL
TIILVCTTGSLTGYVLARQKIKRWKILTFYLLASTTAPIQLFLFPLYFGFARFGLVNNPVAVAFIYTAVYSPFAIMLLRT
YFLAVPKELEESALIDGATHWQVFRRVFLPIVSPGILTVALIVGLNAWNEFLIATTFLQGQDRLTAVVSFFLLSGQYSSD
WGEIMAAALIIILPIVILFVLLQRHFIEGMAGGSVKG
>Mature_277_residues
MNISESRLTFVIVYITLSLLLVITLFPIALTVLNALKPSAEIVQNPLALPSIIRWDNFTRAWTDANFGTTLVNSAVLTGL
TIILVCTTGSLTGYVLARQKIKRWKILTFYLLASTTAPIQLFLFPLYFGFARFGLVNNPVAVAFIYTAVYSPFAIMLLRT
YFLAVPKELEESALIDGATHWQVFRRVFLPIVSPGILTVALIVGLNAWNEFLIATTFLQGQDRLTAVVSFFLLSGQYSSD
WGEIMAAALIIILPIVILFVLLQRHFIEGMAGGSVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=285, Percent_Identity=27.719298245614, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1790464, Length=213, Percent_Identity=30.5164319248826, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=21.4814814814815, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30641; Mature: 30641

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISESRLTFVIVYITLSLLLVITLFPIALTVLNALKPSAEIVQNPLALPSIIRWDNFTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCHH
AWTDANFGTTLVNSAVLTGLTIILVCTTGSLTGYVLARQKIKRWKILTFYLLASTTAPIQ
HHCCCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LFLFPLYFGFARFGLVNNPVAVAFIYTAVYSPFAIMLLRTYFLAVPKELEESALIDGATH
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH
WQVFRRVFLPIVSPGILTVALIVGLNAWNEFLIATTFLQGQDRLTAVVSFFLLSGQYSSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
WGEIMAAALIIILPIVILFVLLQRHFIEGMAGGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNISESRLTFVIVYITLSLLLVITLFPIALTVLNALKPSAEIVQNPLALPSIIRWDNFTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCHH
AWTDANFGTTLVNSAVLTGLTIILVCTTGSLTGYVLARQKIKRWKILTFYLLASTTAPIQ
HHCCCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LFLFPLYFGFARFGLVNNPVAVAFIYTAVYSPFAIMLLRTYFLAVPKELEESALIDGATH
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH
WQVFRRVFLPIVSPGILTVALIVGLNAWNEFLIATTFLQGQDRLTAVVSFFLLSGQYSSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
WGEIMAAALIIILPIVILFVLLQRHFIEGMAGGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]