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The map label for this gene is yurN [H]

Identifier: 110633449

GI number: 110633449

Start: 1201290

End: 1202135

Strand: Direct

Name: yurN [H]

Synonym: Meso_1095

Alternate gene names: 110633449

Gene position: 1201290-1202135 (Clockwise)

Preceding gene: 110633448

Following gene: 110633450

Centisome position: 27.23

GC content: 59.1

Gene sequence:

>846_bases
ATGCACCGACTTTATGTTTTGCCGACATTGATCATCAATGCCGTCATAATTGCCATTCCAGCGCTGCTCACCGTCGCTCT
CGCCTTTTTTGAATGGGACGGAATCAGCACGCCCGTCTTTGTCGGCCTCGACAACTTCCGGGCGCTCTGGGACGACAGCG
TCTTCTGGACGGCGCTGACCAACAACATCATCTGGACGCTGATCTTCCTGACGGTGCCGATCGCCATGGGGCTGCTTGCG
GCAACCATGATGCTGGTGGCGCGCCGCGGCTCGAAATTCTTCCAGGTCATCTATTTTCTGCCCGTCATCATCGCCACCGC
CATCACTGGCCGCGTCTGGCAGGCCATGATCTATTCGCCTGTAACGGGCGTTACCGGCCTCTTGCAGCGCATGGGCATCG
ATATCTCCAACCCGCTCACCGAGACGTCGAGCGCACTTTACGGCATCGCCGTCGTCGACCTCTGGCACTGGTGGGGCTTT
CTCTGCGTGATCTTCTTCGCGGCGCTCCGCCAGGTGCCGGCAGAGCAGATCGAAGCCTCGCGCATCGAAGGCGCGACCTT
CTTCCAGACGATCCGCTACGTGCTTCTTCCAGGCATCATGCCGACGATCACGCTGATGATGATCATGACAGTCATCTGGT
CGTTCCTGGTCTTCGACTTCGTCTACATCCTGACCCAGGGTGGTCCCGCCTATTCCTCCGAAGTGCTGTCGACCTTCGCC
TACCGTTCGGCCTTCTACGATCTGGCGGTCGGAAAGGCGGCAGCGATCTCCGTCGTCATCAGCCTGTTCGGTCTGGCGGC
CACCATCTTCTATATCCGCGCCCAGGCGACGGAGTTCGAAAAATGA

Upstream 100 bases:

>100_bases
GCCCGCTGATCCGCAGATCTTAGGGGCCTGGCCTGCCCAGGCCCCCACATTCCCGCTTTTCCTGGTGGCGCAGGGCGCTC
GACGCCTTGAAAGGTACGCT

Downstream 100 bases:

>100_bases
ACATTTCCGAAAGCCGCCTCACCTTCGTGATCGTCTACATCACGCTGTCGCTGCTGCTCGTCATCACGCTGTTTCCGATC
GCGCTGACGGTGCTCAACGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MHRLYVLPTLIINAVIIAIPALLTVALAFFEWDGISTPVFVGLDNFRALWDDSVFWTALTNNIIWTLIFLTVPIAMGLLA
ATMMLVARRGSKFFQVIYFLPVIIATAITGRVWQAMIYSPVTGVTGLLQRMGIDISNPLTETSSALYGIAVVDLWHWWGF
LCVIFFAALRQVPAEQIEASRIEGATFFQTIRYVLLPGIMPTITLMMIMTVIWSFLVFDFVYILTQGGPAYSSEVLSTFA
YRSAFYDLAVGKAAAISVVISLFGLAATIFYIRAQATEFEK

Sequences:

>Translated_281_residues
MHRLYVLPTLIINAVIIAIPALLTVALAFFEWDGISTPVFVGLDNFRALWDDSVFWTALTNNIIWTLIFLTVPIAMGLLA
ATMMLVARRGSKFFQVIYFLPVIIATAITGRVWQAMIYSPVTGVTGLLQRMGIDISNPLTETSSALYGIAVVDLWHWWGF
LCVIFFAALRQVPAEQIEASRIEGATFFQTIRYVLLPGIMPTITLMMIMTVIWSFLVFDFVYILTQGGPAYSSEVLSTFA
YRSAFYDLAVGKAAAISVVISLFGLAATIFYIRAQATEFEK
>Mature_281_residues
MHRLYVLPTLIINAVIIAIPALLTVALAFFEWDGISTPVFVGLDNFRALWDDSVFWTALTNNIIWTLIFLTVPIAMGLLA
ATMMLVARRGSKFFQVIYFLPVIIATAITGRVWQAMIYSPVTGVTGLLQRMGIDISNPLTETSSALYGIAVVDLWHWWGF
LCVIFFAALRQVPAEQIEASRIEGATFFQTIRYVLLPGIMPTITLMMIMTVIWSFLVFDFVYILTQGGPAYSSEVLSTFA
YRSAFYDLAVGKAAAISVVISLFGLAATIFYIRAQATEFEK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=274, Percent_Identity=28.1021897810219, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787570, Length=228, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790465, Length=263, Percent_Identity=25.0950570342205, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31287; Mature: 31287

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLYVLPTLIINAVIIAIPALLTVALAFFEWDGISTPVFVGLDNFRALWDDSVFWTALT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCHHHHHHH
NNIIWTLIFLTVPIAMGLLAATMMLVARRGSKFFQVIYFLPVIIATAITGRVWQAMIYSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTGVTGLLQRMGIDISNPLTETSSALYGIAVVDLWHWWGFLCVIFFAALRQVPAEQIEAS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RIEGATFFQTIRYVLLPGIMPTITLMMIMTVIWSFLVFDFVYILTQGGPAYSSEVLSTFA
HCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YRSAFYDLAVGKAAAISVVISLFGLAATIFYIRAQATEFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHRLYVLPTLIINAVIIAIPALLTVALAFFEWDGISTPVFVGLDNFRALWDDSVFWTALT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCHHHHHHH
NNIIWTLIFLTVPIAMGLLAATMMLVARRGSKFFQVIYFLPVIIATAITGRVWQAMIYSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTGVTGLLQRMGIDISNPLTETSSALYGIAVVDLWHWWGFLCVIFFAALRQVPAEQIEAS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RIEGATFFQTIRYVLLPGIMPTITLMMIMTVIWSFLVFDFVYILTQGGPAYSSEVLSTFA
HCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YRSAFYDLAVGKAAAISVVISLFGLAATIFYIRAQATEFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]