| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633433
Identifier: 110633433
GI number: 110633433
Start: 1182998
End: 1183900
Strand: Direct
Name: 110633433
Synonym: Meso_1079
Alternate gene names: NA
Gene position: 1182998-1183900 (Clockwise)
Preceding gene: 110633429
Following gene: 110633434
Centisome position: 26.81
GC content: 64.89
Gene sequence:
>903_bases ATGACGAACATCGCTTTCATCGGCTTCGGCGAAGCCGCGCAGGCCATGGCAATGGGCCTGAGCAAGGAGCCCTCGGTGGA AGGGCTTTCCGCCTTCGACCTCCGTTTCGCGGATGCCGCTCAAGCGCCTGATCTCAAGAGCCGGGCGGAGGCGCGGAAAG TAAAGGCCTGCACCAGCCTGGTAGAGGCGGTCGCGGGTGCGGACGTCGTGCTCTCCCTCGTAGTGGGGTCGGCGGCGGTT AAAGTGGGAGAGGATGCGGGCAAGCATCTGAGGAAGGGACAGGTCTTCATCGACCTTAACTCCATCGGGCCGGACGCCAA GAAGAGGGTGGGCGAGGCGCTGGCCAGGGGAGGCGATGCGGACTTCGTCGAAGGCGCCGTCATGGCGCGCGTGCCGCCTT ACGAGCACAAGGTGCCGATCCTCCTGGCCGGAGGGGAGGCGGAGCGCGCGGCAAGGATCCTGACCGGCGCGGGAATGGAT ATCGAGGCTGTCGGGACCGAGATCGGCCAAGCTTGTGCGGTGAAGATGATCCGCTCAATCCTCGTGAAGGGCATCGAGGC GCTCCTGCTCGAAAGTCTTACCGCGGCGGAGAAAGCGGGGGTGCGCGAGCGCATAATCGATTCGATCTCGCAGACCTTTC CCGGGCTCGACTGGCGGCAGACGGCCACCTATTACATCGGCCGCACGCAGCAGCACGGCGCCCGCCGGGTGACGGAGATG AAGGAAGCCGCCGCCACTCTCGAAAGCCTTGGGCTCAAGCCCATTTTGTCGACCGCGATCGCGCAGACGATCGGCGGCTC GTATGAAAAGCTCAAGGCGTCGGGCCTCCCGTTCGATAAGGAGTATCCGGAGATGTTGGCCGCGCTTGCGGCAGGCGGCA ATGCGGGAGAGAAGGCGGCATGA
Upstream 100 bases:
>100_bases TTTGAATACAAAGGTCGACAGAAAAATACAAGAGTGGATGCGGGGCTTGGTCGGCCGGATTGACGGGCCCAGGAACGGTC GTTGAAAAACAGGAGCATCA
Downstream 100 bases:
>100_bases GACCGGAGGTCATGGTGCGGATCCCATTGCCTTCCGCCGGGCTGAAGCTTTTGGAGGAAGATTTTGTCGTCCACTATGCG CCTTCGCCTGAGGAGTTCGA
Product: 6-phosphogluconate dehydrogenase, NAD-binding
Products: NA
Alternate protein names: ORF260 [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTNIAFIGFGEAAQAMAMGLSKEPSVEGLSAFDLRFADAAQAPDLKSRAEARKVKACTSLVEAVAGADVVLSLVVGSAAV KVGEDAGKHLRKGQVFIDLNSIGPDAKKRVGEALARGGDADFVEGAVMARVPPYEHKVPILLAGGEAERAARILTGAGMD IEAVGTEIGQACAVKMIRSILVKGIEALLLESLTAAEKAGVRERIIDSISQTFPGLDWRQTATYYIGRTQQHGARRVTEM KEAAATLESLGLKPILSTAIAQTIGGSYEKLKASGLPFDKEYPEMLAALAAGGNAGEKAA
Sequences:
>Translated_300_residues MTNIAFIGFGEAAQAMAMGLSKEPSVEGLSAFDLRFADAAQAPDLKSRAEARKVKACTSLVEAVAGADVVLSLVVGSAAV KVGEDAGKHLRKGQVFIDLNSIGPDAKKRVGEALARGGDADFVEGAVMARVPPYEHKVPILLAGGEAERAARILTGAGMD IEAVGTEIGQACAVKMIRSILVKGIEALLLESLTAAEKAGVRERIIDSISQTFPGLDWRQTATYYIGRTQQHGARRVTEM KEAAATLESLGLKPILSTAIAQTIGGSYEKLKASGLPFDKEYPEMLAALAAGGNAGEKAA >Mature_299_residues TNIAFIGFGEAAQAMAMGLSKEPSVEGLSAFDLRFADAAQAPDLKSRAEARKVKACTSLVEAVAGADVVLSLVVGSAAVK VGEDAGKHLRKGQVFIDLNSIGPDAKKRVGEALARGGDADFVEGAVMARVPPYEHKVPILLAGGEAERAARILTGAGMDI EAVGTEIGQACAVKMIRSILVKGIEALLLESLTAAEKAGVRERIIDSISQTFPGLDWRQTATYYIGRTQQHGARRVTEMK EAAATLESLGLKPILSTAIAQTIGGSYEKLKASGLPFDKEYPEMLAALAAGGNAGEKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR015814 [H]
Pfam domain/function: PF09130 DUF1932; PF03807 F420_oxidored [H]
EC number: NA
Molecular weight: Translated: 31264; Mature: 31133
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIAFIGFGEAAQAMAMGLSKEPSVEGLSAFDLRFADAAQAPDLKSRAEARKVKACTSL CCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VEAVAGADVVLSLVVGSAAVKVGEDAGKHLRKGQVFIDLNSIGPDAKKRVGEALARGGDA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCC DFVEGAVMARVPPYEHKVPILLAGGEAERAARILTGAGMDIEAVGTEIGQACAVKMIRSI HHHCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVKGIEALLLESLTAAEKAGVRERIIDSISQTFPGLDWRQTATYYIGRTQQHGARRVTEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCHHHHHHHHHHH KEAAATLESLGLKPILSTAIAQTIGGSYEKLKASGLPFDKEYPEMLAALAAGGNAGEKAA HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNIAFIGFGEAAQAMAMGLSKEPSVEGLSAFDLRFADAAQAPDLKSRAEARKVKACTSL CCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VEAVAGADVVLSLVVGSAAVKVGEDAGKHLRKGQVFIDLNSIGPDAKKRVGEALARGGDA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCC DFVEGAVMARVPPYEHKVPILLAGGEAERAARILTGAGMDIEAVGTEIGQACAVKMIRSI HHHCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVKGIEALLLESLTAAEKAGVRERIIDSISQTFPGLDWRQTATYYIGRTQQHGARRVTEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCHHHHHHHHHHH KEAAATLESLGLKPILSTAIAQTIGGSYEKLKASGLPFDKEYPEMLAALAAGGNAGEKAA HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2116370 [H]