Click here to switch to the map view.

The map label for this gene is 110633410

Identifier: 110633410

GI number: 110633410

Start: 1159811

End: 1160797

Strand: Reverse

Name: 110633410

Synonym: Meso_1056

Alternate gene names: NA

Gene position: 1160797-1159811 (Counterclockwise)

Preceding gene: 110633411

Following gene: 110633409

Centisome position: 26.31

GC content: 59.98

Gene sequence:

>987_bases
ATGGGGGTAATCCTTGGTAGCGGCGACTTCACCTATCGGGTCGAGGAGCAATGGGTGAAGCTTCCACCCGGCATGGTCAT
GGGGGACGTCGCCGCGCTCGCCGTCGACCGGCGAGACCGAACCTACCTTTTCAATCGCGGCCCCAATCCCATGATCGTCG
TCGATAGCGAGGGCAATTTTCTGGATAGCTGGGGCCAAGGCGTGTTCTCCAATCCGCATGGTCTGCATATCGCACCTGAT
GACACGATCTTCTGCACGGATGACGGCGATCACACGGTGCGCCGCTGCACGCTGGACGGAAAAGTGCTCCTGACGCTCGG
CGTGCCCGGCAAGCCGTCTCCTTACATGTCCGGCATCCCCTTTCATCGCTGCACGCACACCGCCGTCTCGCCCGAGAACG
ATTTCTATGTCTCCGACGGCTATGGAAATGCGCGGGTTCATAAATACAGCCCCGAAGGGAAACCCATTCTTTCCTGGGGC
GCGCCCGGCATCGACCCCGGCCAATTCAATTTCCCGCACAATATCTGCTGCGATGAAGACGGCTGGGTCTATGTTGCCGA
CCGGGAGAACCACAGGATCCAGGTCTTCGACGGAAACGGGAAATACGAAACGCAGATAAACAACGTGCACCGCCCAAGCG
CTCTGCTTCTCGGCCACGGCAAATGCCCAATCTGCTATGTGGGCGAGATCGGCCCCTATATGAACGTCAATCGCAAGAAT
CCCAATCTAGGCCCGCGCATCTCAATCATGAGCAATGACGGACAACTGCTCGCCCGCTTCGGCGAATTGCCGACGGGGCC
ACGCAATCCAGGCCAATTCCTCTCTCCCCACAGCCTTGCGGTGGATTCCAAAGGCAATCTTTACGTGGGGGAAGTGAGCA
CCCGCGCCTGGCCCTCGCTCTTTCCGGGAGAGCCCCTACCCGACAATCTGCACCGCATGCACCGGCTGACCAAGATCACG
GACCCTGCGGCAGGCGCGGACCGCTGA

Upstream 100 bases:

>100_bases
TCCTTGCGGCAAACGACGTCACCATGCTGGTCGATGCCGGCCAGCGGCGGACGGCATCGCTTCGCAGTCTCATCTGAAGC
CGGGATCCGGAGGGCAGGTC

Downstream 100 bases:

>100_bases
TGCTCGGCAGCCTGCTCGCTCTTTTCGCAGCGGTCACCTTCGCCCTCAACAACGCTGCCTACCGGCGCGGCGCGCTGACC
GGCAGCGTGGCGCAGGGAAT

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; Peptidylglycine Monooxygenase; Peptidylamidoglycolate Lyase; PA14 Domain-Containing Protein; Signal Peptide; Ring Finger; Type I Secretion Outer Membrane Protein lC; Coagulation Factor 5/8 Type Domain Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Peptidylglycine Alpha-Amidating Monooxygenase; PKD Domain Containing Protein; Cell Surface Protein; Surface Layer Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MGVILGSGDFTYRVEEQWVKLPPGMVMGDVAALAVDRRDRTYLFNRGPNPMIVVDSEGNFLDSWGQGVFSNPHGLHIAPD
DTIFCTDDGDHTVRRCTLDGKVLLTLGVPGKPSPYMSGIPFHRCTHTAVSPENDFYVSDGYGNARVHKYSPEGKPILSWG
APGIDPGQFNFPHNICCDEDGWVYVADRENHRIQVFDGNGKYETQINNVHRPSALLLGHGKCPICYVGEIGPYMNVNRKN
PNLGPRISIMSNDGQLLARFGELPTGPRNPGQFLSPHSLAVDSKGNLYVGEVSTRAWPSLFPGEPLPDNLHRMHRLTKIT
DPAAGADR

Sequences:

>Translated_328_residues
MGVILGSGDFTYRVEEQWVKLPPGMVMGDVAALAVDRRDRTYLFNRGPNPMIVVDSEGNFLDSWGQGVFSNPHGLHIAPD
DTIFCTDDGDHTVRRCTLDGKVLLTLGVPGKPSPYMSGIPFHRCTHTAVSPENDFYVSDGYGNARVHKYSPEGKPILSWG
APGIDPGQFNFPHNICCDEDGWVYVADRENHRIQVFDGNGKYETQINNVHRPSALLLGHGKCPICYVGEIGPYMNVNRKN
PNLGPRISIMSNDGQLLARFGELPTGPRNPGQFLSPHSLAVDSKGNLYVGEVSTRAWPSLFPGEPLPDNLHRMHRLTKIT
DPAAGADR
>Mature_327_residues
GVILGSGDFTYRVEEQWVKLPPGMVMGDVAALAVDRRDRTYLFNRGPNPMIVVDSEGNFLDSWGQGVFSNPHGLHIAPDD
TIFCTDDGDHTVRRCTLDGKVLLTLGVPGKPSPYMSGIPFHRCTHTAVSPENDFYVSDGYGNARVHKYSPEGKPILSWGA
PGIDPGQFNFPHNICCDEDGWVYVADRENHRIQVFDGNGKYETQINNVHRPSALLLGHGKCPICYVGEIGPYMNVNRKNP
NLGPRISIMSNDGQLLARFGELPTGPRNPGQFLSPHSLAVDSKGNLYVGEVSTRAWPSLFPGEPLPDNLHRMHRLTKITD
PAAGADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI61098457, Length=300, Percent_Identity=31.3333333333333, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI293336314, Length=328, Percent_Identity=27.7439024390244, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21070984, Length=328, Percent_Identity=27.7439024390244, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21070974, Length=328, Percent_Identity=27.7439024390244, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21070982, Length=328, Percent_Identity=27.7439024390244, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21070980, Length=314, Percent_Identity=28.0254777070064, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI194248079, Length=160, Percent_Identity=30.625, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194248081, Length=160, Percent_Identity=30.625, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI32454739, Length=156, Percent_Identity=31.4102564102564, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI32454737, Length=156, Percent_Identity=31.4102564102564, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533679, Length=316, Percent_Identity=28.7974683544304, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32564868, Length=206, Percent_Identity=28.1553398058252, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17553622, Length=184, Percent_Identity=30.9782608695652, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221330110, Length=286, Percent_Identity=32.5174825174825, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24652264, Length=286, Percent_Identity=32.5174825174825, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24655386, Length=225, Percent_Identity=27.5555555555556, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI22024206, Length=225, Percent_Identity=27.5555555555556, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221330419, Length=225, Percent_Identity=27.5555555555556, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36087; Mature: 35956

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS51125 NHL L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVILGSGDFTYRVEEQWVKLPPGMVMGDVAALAVDRRDRTYLFNRGPNPMIVVDSEGNF
CEEEECCCCEEEEEECCEEECCCCCEECCEEEEEECCCCCEEEEECCCCCEEEECCCCCC
LDSWGQGVFSNPHGLHIAPDDTIFCTDDGDHTVRRCTLDGKVLLTLGVPGKPSPYMSGIP
HHHHCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCC
FHRCTHTAVSPENDFYVSDGYGNARVHKYSPEGKPILSWGAPGIDPGQFNFPHNICCDED
HHHEECCCCCCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCC
GWVYVADRENHRIQVFDGNGKYETQINNVHRPSALLLGHGKCPICYVGEIGPYMNVNRKN
CEEEEEECCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
PNLGPRISIMSNDGQLLARFGELPTGPRNPGQFLSPHSLAVDSKGNLYVGEVSTRAWPSL
CCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCC
FPGEPLPDNLHRMHRLTKITDPAAGADR
CCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GVILGSGDFTYRVEEQWVKLPPGMVMGDVAALAVDRRDRTYLFNRGPNPMIVVDSEGNF
EEEECCCCEEEEEECCEEECCCCCEECCEEEEEECCCCCEEEEECCCCCEEEECCCCCC
LDSWGQGVFSNPHGLHIAPDDTIFCTDDGDHTVRRCTLDGKVLLTLGVPGKPSPYMSGIP
HHHHCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCC
FHRCTHTAVSPENDFYVSDGYGNARVHKYSPEGKPILSWGAPGIDPGQFNFPHNICCDED
HHHEECCCCCCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCC
GWVYVADRENHRIQVFDGNGKYETQINNVHRPSALLLGHGKCPICYVGEIGPYMNVNRKN
CEEEEEECCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
PNLGPRISIMSNDGQLLARFGELPTGPRNPGQFLSPHSLAVDSKGNLYVGEVSTRAWPSL
CCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCC
FPGEPLPDNLHRMHRLTKITDPAAGADR
CCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA