| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is fabG [H]
Identifier: 110633408
GI number: 110633408
Start: 1157853
End: 1158635
Strand: Direct
Name: fabG [H]
Synonym: Meso_1054
Alternate gene names: 110633408
Gene position: 1157853-1158635 (Clockwise)
Preceding gene: 110633407
Following gene: 110633419
Centisome position: 26.24
GC content: 63.86
Gene sequence:
>783_bases ATGGAAGTCAGCCTCGCAGGACGCGCCGCTGTCATTACCGGAGGCTCCAAGGGCCTGGGGTTTGCCACGGCGAACCGCTT CGCCGCATCGGGCGCCGATGTGGCGATCCTGGCGCGGACGCAATCCACCTTGGACGAGGCTGTCGCGGAGATCAGCAAGA CCGCCAAAGGCCGGGTGCTCGGCGTATCCTGCGACGTTGCAAAGGCGGCAGAGACGCAAGCCGCCTATGACAAAGTGGTG TCGGCCTTCGGCAAGGTCGACATCCTCGTCAACAATGCGGGCGAATCCCGGCTGGCGCGATTCGAAGAGATCACCGATGC CATGTGGCACGACGATCTCGAGCAGAAGCTGATGGGCGCGATCCGTATGACGCGCCTGGTCTGGACGCAGATGAAGGAAC GGCGCTGGGGCAGGGTGATCAATGTCTTGTCGATCAACGCCAAGAACTCAAGACCTGGCGGCGCGCCCACGACCGTATCG CGCGCGGCGGGCCTTGCGCTCACCAAGGTGTTGGCAGGCGAAGGCGCGCCTTATGGCGTGCTCGTCAATGCGCTGATGGT GGGCAATATCGTCTCGGACCAGACCTTTCGCCGCCACAGGATGAGGACCGACGGCATAACGCTGGAGGAGATGGTCGCGG AGATCGGGAAGGATATTCCGCTCGGGCGCATGGGGCAGCCCGAGGAATTCGCGAATATGGCCTGCTTCCTGGCGTCGGAC CTAGCGTCCTACGTGACCGGCGCCGCGATCCCCGTGGACGGCGGCAAGGCGCCGTTTATTTGA
Upstream 100 bases:
>100_bases CATAGAGCGCACGCGCTCTATGCATTCGGTTTAGGTGCATGACCTTATCCGAAAAGTCTGCAACTTTTCGGGATCATGCT TTTAGGAAAGGCAAGCCGCC
Downstream 100 bases:
>100_bases TTGCCCTAATCCCGTGCGCGCCCCTCTTGCGATTTCTAACACTTAGCTTCGCTTCGCTTGGCTAAGCGATTGAAGTCGCT CCCCCTTGCGGGAGAGAACG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVLGVSCDVAKAAETQAAYDKVV SAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMGAIRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVS RAAGLALTKVLAGEGAPYGVLVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLASD LASYVTGAAIPVDGGKAPFI
Sequences:
>Translated_260_residues MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVLGVSCDVAKAAETQAAYDKVV SAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMGAIRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVS RAAGLALTKVLAGEGAPYGVLVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLASD LASYVTGAAIPVDGGKAPFI >Mature_260_residues MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVLGVSCDVAKAAETQAAYDKVV SAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMGAIRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVS RAAGLALTKVLAGEGAPYGVLVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLASD LASYVTGAAIPVDGGKAPFI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=30.8880308880309, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=34.9206349206349, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=34.9019607843137, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4503301, Length=258, Percent_Identity=29.4573643410853, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=31.25, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=27.8884462151394, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=30.1960784313725, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=31.8965517241379, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=34.0659340659341, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=28.2258064516129, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=36.5979381443299, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4503817, Length=184, Percent_Identity=30.9782608695652, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=27.1653543307087, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI20149619, Length=188, Percent_Identity=29.2553191489362, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=28.7234042553192, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4758504, Length=270, Percent_Identity=27.037037037037, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI83715985, Length=270, Percent_Identity=26.2962962962963, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=33.201581027668, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=32.6771653543307, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=30.4347826086957, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=28.968253968254, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=29.4820717131474, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=28.2868525896414, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=29.5719844357977, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=29.4573643410853, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=26.8482490272374, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=28.515625, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=28.968253968254, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=25.968992248062, Blast_Score=67, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=31.6, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17561272, Length=258, Percent_Identity=32.9457364341085, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=32.183908045977, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=31.0077519379845, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI25147288, Length=261, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.2681992337165, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=33.2075471698113, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=28.1746031746032, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=30.4, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=29.8449612403101, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=31.5789473684211, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=31.4741035856574, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562910, Length=272, Percent_Identity=30.1470588235294, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17531453, Length=274, Percent_Identity=30.2919708029197, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=28.8389513108614, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=29.7397769516729, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=28.030303030303, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=29.1828793774319, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=28.0155642023346, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=29.0441176470588, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17568967, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=27.0676691729323, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=28.957528957529, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=27.8195488721804, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=28.1481481481481, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=26.3736263736264, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17558006, Length=224, Percent_Identity=28.125, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=26.4227642276423, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=25.9842519685039, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=233, Percent_Identity=27.8969957081545, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=33.0708661417323, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=30.1587301587302, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=30.46875, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=33.852140077821, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=31.2252964426877, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=30.7086614173228, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=31.0077519379845, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641232, Length=139, Percent_Identity=30.9352517985612, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24643142, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356301, Length=190, Percent_Identity=29.4736842105263, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI116007236, Length=149, Percent_Identity=29.5302013422819, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007238, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007234, Length=143, Percent_Identity=31.4685314685315, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=32.4607329842932, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007232, Length=143, Percent_Identity=31.4685314685315, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571387, Length=129, Percent_Identity=29.4573643410853, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27514; Mature: 27514
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVL CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEE GVSCDVAKAAETQAAYDKVVSAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMGA EEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVSRAAGLALTKVLAGEGAPYGV HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH LVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLASD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LASYVTGAAIPVDGGKAPFI HHHHHCCCCEECCCCCCCCC >Mature Secondary Structure MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVL CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEE GVSCDVAKAAETQAAYDKVVSAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMGA EEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVSRAAGLALTKVLAGEGAPYGV HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH LVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLASD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LASYVTGAAIPVDGGKAPFI HHHHHCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]