| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yaiI [C]
Identifier: 110633373
GI number: 110633373
Start: 1119080
End: 1119532
Strand: Reverse
Name: yaiI [C]
Synonym: Meso_1019
Alternate gene names: 110633373
Gene position: 1119532-1119080 (Counterclockwise)
Preceding gene: 110633375
Following gene: 110633372
Centisome position: 25.37
GC content: 63.13
Gene sequence:
>453_bases GTGGCCACGATCTATGTTGACGCTGACGCATGTCCGGTAAAGGAGGAGGTCACCCGCGTGGCCGAGCGCCATGGGCTCCC GGTTGTCTTCGTCTCCAATGGAGGGCTGCGGCCTTCCCGCGATCCGATGATTCGTCACATTGTGGTGCCTGGCAAAGCCG ACGCGGCCGACGATTGGATCGTGGAGAATGCGTCAAAAGGAGATATCGCCATCACCGCTGACGTGCCGCTTGCGGCAAGG CTGGTGGAGAAGGGCTTGCAGGTGCTGGGTCCCACCGGCCGCACCTTCACCCGCGAAAGCATCGGCATGGATGTGGCCAT GCGCAACCTGAAGCAGGATCTGCGCGAGGCGGGCGAGATCCGGGGCTACAACGCCAGTTTCACGGCGAAAGATCGCAGCA GCTTCCTTCAAGGTCTCGACATGGCAGTCAGGCGGGCTCTGCGCGGCGGCTGA
Upstream 100 bases:
>100_bases ACGATTGGCAATGAGTATCTTTTTGAACATGCGGCCTTTCCCCTCCCCGGCAATCTTTTCTATGGTTTCGTAGCGCTCTG CTCAAGCGGGAGACCAATTC
Downstream 100 bases:
>100_bases GGCTTGAGTTGCCCGCGGGGGTTCTGCACAAAGAAGTGTTTGCTCCCTCGCTGCGGGCAGGTGACAAAGCCCTGCGCCTA CGCTAGGTATCACGCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MATIYVDADACPVKEEVTRVAERHGLPVVFVSNGGLRPSRDPMIRHIVVPGKADAADDWIVENASKGDIAITADVPLAAR LVEKGLQVLGPTGRTFTRESIGMDVAMRNLKQDLREAGEIRGYNASFTAKDRSSFLQGLDMAVRRALRGG
Sequences:
>Translated_150_residues MATIYVDADACPVKEEVTRVAERHGLPVVFVSNGGLRPSRDPMIRHIVVPGKADAADDWIVENASKGDIAITADVPLAAR LVEKGLQVLGPTGRTFTRESIGMDVAMRNLKQDLREAGEIRGYNASFTAKDRSSFLQGLDMAVRRALRGG >Mature_149_residues ATIYVDADACPVKEEVTRVAERHGLPVVFVSNGGLRPSRDPMIRHIVVPGKADAADDWIVENASKGDIAITADVPLAARL VEKGLQVLGPTGRTFTRESIGMDVAMRNLKQDLREAGEIRGYNASFTAKDRSSFLQGLDMAVRRALRGG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=42.9577464788732, Blast_Score=100, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16232; Mature: 16101
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIYVDADACPVKEEVTRVAERHGLPVVFVSNGGLRPSRDPMIRHIVVPGKADAADDWI CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHH VENASKGDIAITADVPLAARLVEKGLQVLGPTGRTFTRESIGMDVAMRNLKQDLREAGEI CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RGYNASFTAKDRSSFLQGLDMAVRRALRGG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATIYVDADACPVKEEVTRVAERHGLPVVFVSNGGLRPSRDPMIRHIVVPGKADAADDWI EEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHH VENASKGDIAITADVPLAARLVEKGLQVLGPTGRTFTRESIGMDVAMRNLKQDLREAGEI CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RGYNASFTAKDRSSFLQGLDMAVRRALRGG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]