| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633364
Identifier: 110633364
GI number: 110633364
Start: 1107745
End: 1108695
Strand: Reverse
Name: 110633364
Synonym: Meso_1010
Alternate gene names: NA
Gene position: 1108695-1107745 (Counterclockwise)
Preceding gene: 110633366
Following gene: 110633363
Centisome position: 25.13
GC content: 61.72
Gene sequence:
>951_bases ATGGCAAGCATGTGGTTGGTGGCCAAACGAATCATAGTGATATCCTTCCTTGCAGCGGGGGTTCCAGCAGCCCCTGCCCT GGCCCAGGATGACAGCCGGAATTTGCCCGGCCTGACCGAATTTGCCGCGCCGCAAACCCAGTCTCCCCTTGCCCAGGCGA AAGCGTCGCAGGTGGTGCTTGCAGCACAGCTTACCAAGGATGCGCCGGAAATTCCGGGCGGCCTGACATGGCGTGTCTTC AGCCCGGAACCGGGGCCCGATGGCAAATTGCCGCTCGTGGCGACAGCAAAGGGCGGAACGAGCGCCTTTTCGCTCGCGCC CGGCAGCTATCTGGTCCATGCCGCTTACGGGCGAGCGGGCGCGACCAAGCGAATAACGGTCGCGGGAGAAGCCAAGCACG AGAGCCTCGTGCTCGATGCTGGAGGTCTCAAGCTTGACGCTGTGCTTCCCGGCGACATCCGGATTCCCGAGAAGCAACTG CGCTTTTCCATTTATGAGGCAGAGCCGGACGCTACCGGAGAGCGCCCGTTGATTGTACCGGATGTGCGGCCGAACGCGAT CGTGCGGCTCAATGCAGGCACATATCACGTCGTCTCCAACTATGGCCCGATCGCAGTCATCCGCTCCGACATTCGCGTGG AGGCGGGCCAATTGACGGAAGCAACGGTCGAGCATAGGGCGGCCGAGATGACGCTGAAGCTGGTGCGTGAAACCGGAGGC GAAGCGATCGCCGACACGGCGTGGTCTATCCTTACGGAGACGGGCGAGATCGTGCTCGATACGGTCGGCGCCTATGCCTC GATCGTGCTGCCCGAGGGCGACTATACGATTGTGGCGAAGAACCGAGAGCGCATCTATCAGCGCGATTTCACGGTGACAC CCGGCCAGAAGCAAGACGTGGAGCTTCTGCCCGAGGACCTCATTCCGCCCGATGAAGAATTTACGGATTAG
Upstream 100 bases:
>100_bases TGCTCAAGAACACATCTCCTGTGGTGGAAGGGCAGCCGAAACCTTCGCGAGGCAAAGCTCGCATGGCTGCAGTCTTGAAA TTGCCACCGGCTTGGGCTTC
Downstream 100 bases:
>100_bases GCCGTGAACCCATAAAGGCAGCATGACCGACTTGGGGGTGGTGAAGCAGACGGTCAGCTTCTGGGGGCTGAAGTTGAGAA AGAGGCCGTTCAGGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MASMWLVAKRIIVISFLAAGVPAAPALAQDDSRNLPGLTEFAAPQTQSPLAQAKASQVVLAAQLTKDAPEIPGGLTWRVF SPEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHAAYGRAGATKRITVAGEAKHESLVLDAGGLKLDAVLPGDIRIPEKQL RFSIYEAEPDATGERPLIVPDVRPNAIVRLNAGTYHVVSNYGPIAVIRSDIRVEAGQLTEATVEHRAAEMTLKLVRETGG EAIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDFTVTPGQKQDVELLPEDLIPPDEEFTD
Sequences:
>Translated_316_residues MASMWLVAKRIIVISFLAAGVPAAPALAQDDSRNLPGLTEFAAPQTQSPLAQAKASQVVLAAQLTKDAPEIPGGLTWRVF SPEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHAAYGRAGATKRITVAGEAKHESLVLDAGGLKLDAVLPGDIRIPEKQL RFSIYEAEPDATGERPLIVPDVRPNAIVRLNAGTYHVVSNYGPIAVIRSDIRVEAGQLTEATVEHRAAEMTLKLVRETGG EAIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDFTVTPGQKQDVELLPEDLIPPDEEFTD >Mature_315_residues ASMWLVAKRIIVISFLAAGVPAAPALAQDDSRNLPGLTEFAAPQTQSPLAQAKASQVVLAAQLTKDAPEIPGGLTWRVFS PEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHAAYGRAGATKRITVAGEAKHESLVLDAGGLKLDAVLPGDIRIPEKQLR FSIYEAEPDATGERPLIVPDVRPNAIVRLNAGTYHVVSNYGPIAVIRSDIRVEAGQLTEATVEHRAAEMTLKLVRETGGE AIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDFTVTPGQKQDVELLPEDLIPPDEEFTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33649; Mature: 33517
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMWLVAKRIIVISFLAAGVPAAPALAQDDSRNLPGLTEFAAPQTQSPLAQAKASQVVL CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEE AAQLTKDAPEIPGGLTWRVFSPEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHAAYGRAG EEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCC ATKRITVAGEAKHESLVLDAGGLKLDAVLPGDIRIPEKQLRFSIYEAEPDATGERPLIVP CCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCCCEEEE DVRPNAIVRLNAGTYHVVSNYGPIAVIRSDIRVEAGQLTEATVEHRAAEMTLKLVRETGG CCCCCEEEEECCCEEEEECCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC EAIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDFTVTPGQKQDV CHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCHHHHHHCCCEECCCCCCCH ELLPEDLIPPDEEFTD HHCHHHCCCCCHHCCC >Mature Secondary Structure ASMWLVAKRIIVISFLAAGVPAAPALAQDDSRNLPGLTEFAAPQTQSPLAQAKASQVVL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEE AAQLTKDAPEIPGGLTWRVFSPEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHAAYGRAG EEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCC ATKRITVAGEAKHESLVLDAGGLKLDAVLPGDIRIPEKQLRFSIYEAEPDATGERPLIVP CCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCCCEEEE DVRPNAIVRLNAGTYHVVSNYGPIAVIRSDIRVEAGQLTEATVEHRAAEMTLKLVRETGG CCCCCEEEEECCCEEEEECCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC EAIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDFTVTPGQKQDV CHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCHHHHHHCCCEECCCCCCCH ELLPEDLIPPDEEFTD HHCHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA