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The map label for this gene is cvpA [H]

Identifier: 110633338

GI number: 110633338

Start: 1079733

End: 1080320

Strand: Reverse

Name: cvpA [H]

Synonym: Meso_0984

Alternate gene names: 110633338

Gene position: 1080320-1079733 (Counterclockwise)

Preceding gene: 110633339

Following gene: 110633337

Centisome position: 24.48

GC content: 60.37

Gene sequence:

>588_bases
ATGCCAATCACGCTGCTTGACGGCATTCTCGTGGGCTTTACGCTGGTCTCGGCGATGCTCGCCATGGTGCGCGGCTTCTC
GCGCGAAGTCCTCTCCATCGCCTCGTGGGTGCTGGCGGCGATAGCCGCCTATTTCCTTTACCCGGTGGTACTGCCCTACC
TGACGCCCTATATAGACAATCCGATGCTCGCGGTTGTCGCGTCGGCTGCGGCGGTGTTCTTCGTTGCGCTGATTATCGTC
ACGATCATCACCATGAAGATCGCCGACTTTATCGTCGATTCGCGAATCGGTGCGCTGGACCGCACGCTTGGCTTCCTTTA
TGGTGCCGCGCGTGGTGTCTTGGTGGTGGCGGTGGCGCTTTTGTTCCTGAATTGGCTTTTGGGATCAAACCCGCCCGCAT
GGATCACGGAAGCAAAGTCCCGCCCGCTCCTCGAAGGGGTGGGAAGCTGGCTGCAGAGCCTATTGCCCGAGGATCCCGAG
ACCACCATATTCGACCGTCTGTCGCCGAATGCGCCCGAAGCCGATCCTGCGCCTAACACGGGATCGCCTCAACAGGGAGC
GGCGGACGGAGCTGAAACAAGCAACTGA

Upstream 100 bases:

>100_bases
GCCCGTATAGCGGGGTCGCGGGTACGGGAGTAAAGAATAGCCTTGCGCCGCGTCAGGAGCAGTGAAAAAGATCCTGCCGT
GAAGAAAAACTGGGGTGCTG

Downstream 100 bases:

>100_bases
CGGTCTGTGATGGCCGCCGAGCACACCAACTGAAACGAGGCGGCCAGTGATGGCGGAACGTGAGAATTTGCCTCTGATGG
GCGAAGCCGACGATCATTTC

Product: colicin V production protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPITLLDGILVGFTLVSAMLAMVRGFSREVLSIASWVLAAIAAYFLYPVVLPYLTPYIDNPMLAVVASAAAVFFVALIIV
TIITMKIADFIVDSRIGALDRTLGFLYGAARGVLVVAVALLFLNWLLGSNPPAWITEAKSRPLLEGVGSWLQSLLPEDPE
TTIFDRLSPNAPEADPAPNTGSPQQGAADGAETSN

Sequences:

>Translated_195_residues
MPITLLDGILVGFTLVSAMLAMVRGFSREVLSIASWVLAAIAAYFLYPVVLPYLTPYIDNPMLAVVASAAAVFFVALIIV
TIITMKIADFIVDSRIGALDRTLGFLYGAARGVLVVAVALLFLNWLLGSNPPAWITEAKSRPLLEGVGSWLQSLLPEDPE
TTIFDRLSPNAPEADPAPNTGSPQQGAADGAETSN
>Mature_194_residues
PITLLDGILVGFTLVSAMLAMVRGFSREVLSIASWVLAAIAAYFLYPVVLPYLTPYIDNPMLAVVASAAAVFFVALIIVT
IITMKIADFIVDSRIGALDRTLGFLYGAARGVLVVAVALLFLNWLLGSNPPAWITEAKSRPLLEGVGSWLQSLLPEDPET
TIFDRLSPNAPEADPAPNTGSPQQGAADGAETSN

Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CvpA [H]

Homologues:

Organism=Escherichia coli, GI1788652, Length=120, Percent_Identity=35, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 20703; Mature: 20572

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITLLDGILVGFTLVSAMLAMVRGFSREVLSIASWVLAAIAAYFLYPVVLPYLTPYIDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PMLAVVASAAAVFFVALIIVTIITMKIADFIVDSRIGALDRTLGFLYGAARGVLVVAVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLNWLLGSNPPAWITEAKSRPLLEGVGSWLQSLLPEDPETTIFDRLSPNAPEADPAPNT
HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC
GSPQQGAADGAETSN
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PITLLDGILVGFTLVSAMLAMVRGFSREVLSIASWVLAAIAAYFLYPVVLPYLTPYIDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PMLAVVASAAAVFFVALIIVTIITMKIADFIVDSRIGALDRTLGFLYGAARGVLVVAVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLNWLLGSNPPAWITEAKSRPLLEGVGSWLQSLLPEDPETTIFDRLSPNAPEADPAPNT
HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC
GSPQQGAADGAETSN
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]