Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110633245

Identifier: 110633245

GI number: 110633245

Start: 980879

End: 981376

Strand: Direct

Name: 110633245

Synonym: Meso_0889

Alternate gene names: NA

Gene position: 980879-981376 (Clockwise)

Preceding gene: 110633244

Following gene: 110633246

Centisome position: 22.23

GC content: 65.66

Gene sequence:

>498_bases
ATGCGATACGGTTCGGCGGCGACCGCGCGGCGCGCGCAGCGCGCGCTCTTTGAAGGGGCGCCGGTTTCTCTCGGATTGCT
GGCACAGGCATGCAGGCTTTCGGAAACCTATCTGGCAACGCTTGCCCGCAGGGAAGGCTGGCGGAAGGCGGACGAGGCGC
CGCAGGAGGACACCGAGGCGCTGGAGCGGCGCCTGGTGGTGCTCTCCGATCAATTGGTCAGCGACCTGGAGACGGCAGGC
GCCGAGGGCAGGGCCGCCGGCGCATATGACAAGCACCGCATCGACGCGCTCTCGACCATGCTGCGGATGGTCGAGAAGCT
TGGCGAGATGACGCGCCTTCCCGAACGCGCAGCAGAAAAGCAGAAGAAAAGCGATGCAGAATTGGCCGCCGCGCTCTCCC
TCATCGATGCCCGTATCGTGGAACTCGCTTGTGAACTCGCTGCCACCATGGGCAGCGAGGATGCTGAACGGGGAAGCGGC
GCCGCGGATCTTGTCTGA

Upstream 100 bases:

>100_bases
GAATGCCCCGAAGCATTTTGGACCTCCTTGGACCTTGAACTGAGCAAGCGCTGCGCCTCCCGGCCAGCGCTTTTTTGTTT
CCCGATTTTTTGGAGGATCG

Downstream 100 bases:

>100_bases
ATGGTTCGGGTCCGCCCGCCTGCCGCAATATCCGGCCGGTGCATCGTTGAAGGACACCTGGCTGGTGATGGGCGGCAGGG
GCTCCGGCAAGACGAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRYGSAATARRAQRALFEGAPVSLGLLAQACRLSETYLATLARREGWRKADEAPQEDTEALERRLVVLSDQLVSDLETAG
AEGRAAGAYDKHRIDALSTMLRMVEKLGEMTRLPERAAEKQKKSDAELAAALSLIDARIVELACELAATMGSEDAERGSG
AADLV

Sequences:

>Translated_165_residues
MRYGSAATARRAQRALFEGAPVSLGLLAQACRLSETYLATLARREGWRKADEAPQEDTEALERRLVVLSDQLVSDLETAG
AEGRAAGAYDKHRIDALSTMLRMVEKLGEMTRLPERAAEKQKKSDAELAAALSLIDARIVELACELAATMGSEDAERGSG
AADLV
>Mature_165_residues
MRYGSAATARRAQRALFEGAPVSLGLLAQACRLSETYLATLARREGWRKADEAPQEDTEALERRLVVLSDQLVSDLETAG
AEGRAAGAYDKHRIDALSTMLRMVEKLGEMTRLPERAAEKQKKSDAELAAALSLIDARIVELACELAATMGSEDAERGSG
AADLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17776; Mature: 17776

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGSAATARRAQRALFEGAPVSLGLLAQACRLSETYLATLARREGWRKADEAPQEDTEA
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LERRLVVLSDQLVSDLETAGAEGRAAGAYDKHRIDALSTMLRMVEKLGEMTRLPERAAEK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKKSDAELAAALSLIDARIVELACELAATMGSEDAERGSGAADLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MRYGSAATARRAQRALFEGAPVSLGLLAQACRLSETYLATLARREGWRKADEAPQEDTEA
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LERRLVVLSDQLVSDLETAGAEGRAAGAYDKHRIDALSTMLRMVEKLGEMTRLPERAAEK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKKSDAELAAALSLIDARIVELACELAATMGSEDAERGSGAADLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA