| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633244
Identifier: 110633244
GI number: 110633244
Start: 979099
End: 979605
Strand: Direct
Name: 110633244
Synonym: Meso_0887
Alternate gene names: NA
Gene position: 979099-979605 (Clockwise)
Preceding gene: 110633243
Following gene: 110633245
Centisome position: 22.19
GC content: 58.19
Gene sequence:
>507_bases ATGATAAGCGCCGTAAAGAGGGCGCAGAGTAGCTATCCGGTAGATCTGGAGGGCCTTTGCCGTGAACTCGGCATCCGCGT TCATTCTGCATGGTTGGCTGATGACGTTTCCGGTGAATTGGTCCCCGTGAGTGAGGGCCGTTACCAGATCAATGTGAACG CCACCCATGGTGAGCGCCGCCGTAGGTTTACGATAGCACATGAGTTGGGGCATTTCTTCCATCACCGCCACCTGATTGGC ACCGGGATTGACGATGATCGGGCTTATCGCAGCACGAGCGCGGGGCGCTACCACAACACGAGTATAGGCCCGCGCGAGGA GACGGAAGCAAACCGCTTCGCGGCCAACCTGCTAATGCCCTACGATCTGATCAGTCGCCTGAGGGCGGAAGGGAAAACCA CGCCGAAAGCTATGGCGGATGCCCTTCAAGTCTCTCTACCTGCCATGCGAATAAGGCTGGGCCTTGAGCCTTATCCGACA GCGGCTGAGGAATTTGGCCCCGGCTAG
Upstream 100 bases:
>100_bases TTAATTGGCGAATACATGGAGCTTGTGAAGAACTCTGTTAGCTCGGAGCAGGCCAACGAGATCGCAGAAGTGACGGCGAA GGAGGTTGTCAGTGACGACG
Downstream 100 bases:
>100_bases AGCTTTGATCGCTTCCTTAGCCGGAGAAGCCTTCGCGCCTTCTGCTTAGGCGTGATCGGCTTCACCAATCCGCCGATAGG TGAGGCGCTTGCCTTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MISAVKRAQSSYPVDLEGLCRELGIRVHSAWLADDVSGELVPVSEGRYQINVNATHGERRRRFTIAHELGHFFHHRHLIG TGIDDDRAYRSTSAGRYHNTSIGPREETEANRFAANLLMPYDLISRLRAEGKTTPKAMADALQVSLPAMRIRLGLEPYPT AAEEFGPG
Sequences:
>Translated_168_residues MISAVKRAQSSYPVDLEGLCRELGIRVHSAWLADDVSGELVPVSEGRYQINVNATHGERRRRFTIAHELGHFFHHRHLIG TGIDDDRAYRSTSAGRYHNTSIGPREETEANRFAANLLMPYDLISRLRAEGKTTPKAMADALQVSLPAMRIRLGLEPYPT AAEEFGPG >Mature_168_residues MISAVKRAQSSYPVDLEGLCRELGIRVHSAWLADDVSGELVPVSEGRYQINVNATHGERRRRFTIAHELGHFFHHRHLIG TGIDDDRAYRSTSAGRYHNTSIGPREETEANRFAANLLMPYDLISRLRAEGKTTPKAMADALQVSLPAMRIRLGLEPYPT AAEEFGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18723; Mature: 18723
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAVKRAQSSYPVDLEGLCRELGIRVHSAWLADDVSGELVPVSEGRYQINVNATHGERR CCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHH RRFTIAHELGHFFHHRHLIGTGIDDDRAYRSTSAGRYHNTSIGPREETEANRFAANLLMP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH YDLISRLRAEGKTTPKAMADALQVSLPAMRIRLGLEPYPTAAEEFGPG HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCHHHCCCC >Mature Secondary Structure MISAVKRAQSSYPVDLEGLCRELGIRVHSAWLADDVSGELVPVSEGRYQINVNATHGERR CCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHH RRFTIAHELGHFFHHRHLIGTGIDDDRAYRSTSAGRYHNTSIGPREETEANRFAANLLMP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH YDLISRLRAEGKTTPKAMADALQVSLPAMRIRLGLEPYPTAAEEFGPG HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA