| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110633243
Identifier: 110633243
GI number: 110633243
Start: 978738
End: 979130
Strand: Direct
Name: 110633243
Synonym: Meso_0886
Alternate gene names: NA
Gene position: 978738-979130 (Clockwise)
Preceding gene: 110633242
Following gene: 110633244
Centisome position: 22.18
GC content: 52.67
Gene sequence:
>393_bases ATGGGGGTAATCGGGATGGGCGCAGAGGAAGCTGCAAGAGACGTGATCGAATATGCGTCACAAATAGGACGCCTCGATTT TCTATCGTCCGTGCTAGCTGTGTTGGCGCTGATTCTCGCGTTAGCTGCGTTCCCGCTCTTTTTCTTTGTGCAGCATCGGG CAAAAACGATAGCAGAGAAAGAGGCCAAGGAAGCGCTTAAGGACGCCGCTCGGAGAGTCGAAGATTTGGCGATCTCCAAA ATGGAGACGCTGCTACCTACATTAATTGGCGAATACATGGAGCTTGTGAAGAACTCTGTTAGCTCGGAGCAGGCCAACGA GATCGCAGAAGTGACGGCGAAGGAGGTTGTCAGTGACGACGATGATAAGCGCCGTAAAGAGGGCGCAGAGTAG
Upstream 100 bases:
>100_bases AAGGATAAACCCCGCAGCAACCGCGCCAAACAGGACTCCAAAAGCAACCCGTCCGCTTCGCGTAGTTGAATAGTAACCTT TCCAGCGTCATAACCGATAG
Downstream 100 bases:
>100_bases CTATCCGGTAGATCTGGAGGGCCTTTGCCGTGAACTCGGCATCCGCGTTCATTCTGCATGGTTGGCTGATGACGTTTCCG GTGAATTGGTCCCCGTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGVIGMGAEEAARDVIEYASQIGRLDFLSSVLAVLALILALAAFPLFFFVQHRAKTIAEKEAKEALKDAARRVEDLAISK METLLPTLIGEYMELVKNSVSSEQANEIAEVTAKEVVSDDDDKRRKEGAE
Sequences:
>Translated_130_residues MGVIGMGAEEAARDVIEYASQIGRLDFLSSVLAVLALILALAAFPLFFFVQHRAKTIAEKEAKEALKDAARRVEDLAISK METLLPTLIGEYMELVKNSVSSEQANEIAEVTAKEVVSDDDDKRRKEGAE >Mature_129_residues GVIGMGAEEAARDVIEYASQIGRLDFLSSVLAVLALILALAAFPLFFFVQHRAKTIAEKEAKEALKDAARRVEDLAISKM ETLLPTLIGEYMELVKNSVSSEQANEIAEVTAKEVVSDDDDKRRKEGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14227; Mature: 14096
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIGMGAEEAARDVIEYASQIGRLDFLSSVLAVLALILALAAFPLFFFVQHRAKTIAEK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKEALKDAARRVEDLAISKMETLLPTLIGEYMELVKNSVSSEQANEIAEVTAKEVVSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDKRRKEGAE HHHHHHCCCC >Mature Secondary Structure GVIGMGAEEAARDVIEYASQIGRLDFLSSVLAVLALILALAAFPLFFFVQHRAKTIAEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKEALKDAARRVEDLAISKMETLLPTLIGEYMELVKNSVSSEQANEIAEVTAKEVVSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDKRRKEGAE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA