Click here to switch to the map view.

The map label for this gene is 110633235

Identifier: 110633235

GI number: 110633235

Start: 971039

End: 971839

Strand: Direct

Name: 110633235

Synonym: Meso_0878

Alternate gene names: NA

Gene position: 971039-971839 (Clockwise)

Preceding gene: 110633234

Following gene: 110633236

Centisome position: 22.01

GC content: 66.54

Gene sequence:

>801_bases
ATGATGACGCGTTACGCAAAACGGCCTAGGTCGCGGGCTGGCGCGAGGGGAAAGCGCACCGGCTGGCTGCGGGCCGGTAT
CTCCGGTGCTGCCGCCGCGGCCGGGCGCAATCCGGTGGCCGTCGGCGGCACGACGGCATTCCTCGTTTCTCTGGCCTTCG
TTTCGGCCAACGCGCTCTTTTATCAGCCTCAGGTGCATCCGAGCGCCTTTCTGTCGACGCGGATATTGGGTCCGCGCGCG
CTGCCGGACCTGACCCAGCATCCGCATCCCCAGTCGGCACCAAGAGAAATCCGCCAGATCGAGCCTGCCGGATCTGCGGT
GGAGACTTCGCCGGATTCGACCGGTTCCGTGCCGCCGCCGGCTGGCGGCGACGGGACGGTGCGGTCGGTTCAGACGGTGC
TGAATGATCTCGGGCTTTATGCCGGTCCGATCGACGGCATGACCGGACCGCAGACGAATGCGGCCGTGGAGACCTATCGC
AGGATCGTCGGGCTGGAGCCGGGCAGCCAGATCGACGGCGCTCTGCTCCATCAGCTTGGCCTGCGCGATGACGGCCAGGC
GGCGCAGGAGGCATCCACAGCGCCGCAGACCGCCTCCGCCGAGCCGGGAGACTCAAACATTTCCAAGGTCCAGGCGGGCC
TGAAGGCATTCGGCAATGACGGCATCGAGATCGACGGTATGATGGGCGAGCGGACGCGCGAGGCCATTCGCGAGTTCCAG
TCGCTCTTCGGCTTGCCTGTCACAGGGGAGCCCGATGCACCTCTGGTGGCCAAGATGCGGGAGATCGGCCTGATCAACTG
A

Upstream 100 bases:

>100_bases
CGGGTTCACGTTTCCTTGCCCGCCGGCCCGGCCGACGCTTGTCGGGAAGTGGAGGATTCGAGCTTCGCTGCGAGCGGGGC
GAATTATAATCGCGAGTGGT

Downstream 100 bases:

>100_bases
GGCGGGCGCATCCGTCGACACCAGCCCTACAGGAGCGCCAATGCGGGTCACCAGCGAATTTTGGGTTTCCCTCCTGATCA
GGCGGGTTTTTTCCGACGGC

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MMTRYAKRPRSRAGARGKRTGWLRAGISGAAAAAGRNPVAVGGTTAFLVSLAFVSANALFYQPQVHPSAFLSTRILGPRA
LPDLTQHPHPQSAPREIRQIEPAGSAVETSPDSTGSVPPPAGGDGTVRSVQTVLNDLGLYAGPIDGMTGPQTNAAVETYR
RIVGLEPGSQIDGALLHQLGLRDDGQAAQEASTAPQTASAEPGDSNISKVQAGLKAFGNDGIEIDGMMGERTREAIREFQ
SLFGLPVTGEPDAPLVAKMREIGLIN

Sequences:

>Translated_266_residues
MMTRYAKRPRSRAGARGKRTGWLRAGISGAAAAAGRNPVAVGGTTAFLVSLAFVSANALFYQPQVHPSAFLSTRILGPRA
LPDLTQHPHPQSAPREIRQIEPAGSAVETSPDSTGSVPPPAGGDGTVRSVQTVLNDLGLYAGPIDGMTGPQTNAAVETYR
RIVGLEPGSQIDGALLHQLGLRDDGQAAQEASTAPQTASAEPGDSNISKVQAGLKAFGNDGIEIDGMMGERTREAIREFQ
SLFGLPVTGEPDAPLVAKMREIGLIN
>Mature_266_residues
MMTRYAKRPRSRAGARGKRTGWLRAGISGAAAAAGRNPVAVGGTTAFLVSLAFVSANALFYQPQVHPSAFLSTRILGPRA
LPDLTQHPHPQSAPREIRQIEPAGSAVETSPDSTGSVPPPAGGDGTVRSVQTVLNDLGLYAGPIDGMTGPQTNAAVETYR
RIVGLEPGSQIDGALLHQLGLRDDGQAAQEASTAPQTASAEPGDSNISKVQAGLKAFGNDGIEIDGMMGERTREAIREFQ
SLFGLPVTGEPDAPLVAKMREIGLIN

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27711; Mature: 27711

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTRYAKRPRSRAGARGKRTGWLRAGISGAAAAAGRNPVAVGGTTAFLVSLAFVSANALF
CCCCHHCCCHHHCCCCCCCCHHHHHCCCHHHHHCCCCCEEECHHHHHHHHHHHHHCCCEE
YQPQVHPSAFLSTRILGPRALPDLTQHPHPQSAPREIRQIEPAGSAVETSPDSTGSVPPP
ECCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AGGDGTVRSVQTVLNDLGLYAGPIDGMTGPQTNAAVETYRRIVGLEPGSQIDGALLHQLG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
LRDDGQAAQEASTAPQTASAEPGDSNISKVQAGLKAFGNDGIEIDGMMGERTREAIREFQ
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH
SLFGLPVTGEPDAPLVAKMREIGLIN
HHHCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMTRYAKRPRSRAGARGKRTGWLRAGISGAAAAAGRNPVAVGGTTAFLVSLAFVSANALF
CCCCHHCCCHHHCCCCCCCCHHHHHCCCHHHHHCCCCCEEECHHHHHHHHHHHHHCCCEE
YQPQVHPSAFLSTRILGPRALPDLTQHPHPQSAPREIRQIEPAGSAVETSPDSTGSVPPP
ECCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AGGDGTVRSVQTVLNDLGLYAGPIDGMTGPQTNAAVETYRRIVGLEPGSQIDGALLHQLG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
LRDDGQAAQEASTAPQTASAEPGDSNISKVQAGLKAFGNDGIEIDGMMGERTREAIREFQ
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH
SLFGLPVTGEPDAPLVAKMREIGLIN
HHHCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA