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The map label for this gene is ssuC [C]

Identifier: 110633171

GI number: 110633171

Start: 903035

End: 903847

Strand: Reverse

Name: ssuC [C]

Synonym: Meso_0814

Alternate gene names: 110633171

Gene position: 903847-903035 (Counterclockwise)

Preceding gene: 110633172

Following gene: 110633170

Centisome position: 20.48

GC content: 60.15

Gene sequence:

>813_bases
ATGAGTACCACCACGGTGAACGCCCCCGCATCTCCCTCCCGCCCGGCCGTGCTCCAGCCTCATGTGCTGATCGGTCTGCT
CATTCTGTCGGCCGTGCTGCTGATCTGGGAGTTCTTGCCGCCCGCCCTCGGCGTGCCCCGGTTCATCATCCCCACCATCA
GCGATATGGCGGGCGAACTGGGGCGAATGTACCGGCGCGAAAATCTCATCCCCAATATCTTATCGACGGCACTTTATACG
GTTCTGGGCTTTGCCATAGGCTCGATGCTCGGAGCGATCATTGGCTATCTGCTGGGCCTATCACGCTTTTGGGAGAAGGT
GCTCTCTCCCTATATCCTGGCGCTACAGATCGCGCCGAAGGTCGCCTTCGCGCCGCTGTTCATCATGTGGTTCGGTTACA
ATGCGACACCCAAGCTGCTGGTGACCGTGCTGATCGTGTTCTTCCCCGTGCTGGTCAATGTGCTCGCGGCGATGAAGACG
GTGGATCGCGACATGGTCAATCTCGCCAGGGCCTACAATCTCAGCCGCTGGCAGATTTTCCTCAAGGTGCAGTTTCCATC
CACCCTCCCCAACCTTCTGGCGGGGCTGCGGATTTCCTCCACGCTCGCGGTGATCGGGGTCACGGTGGGCGAACTGGTGG
GCGGCAACACGGGGCTGGGCTTCCTGATCGCCTATGGCGGCGGGCAGGCTAATGCGGCGATGGTCTTTAATGCCATCATC
CTGCTTACCATCATCGGGATCGCACTCTACAGCGTCCTGGCCTGGGCCGAGGAACGGCTGCTGCACTACATCCCCAAATC
CCACATTTCCTAA

Upstream 100 bases:

>100_bases
CTCCGAATAGAGACTTGGCTTCGTGGTCCGGCCGGCTCGTCCGGCCGCGCTTTTTGTGGTGTATCGCACCTCTTCTCACA
CATGCCAATGGTCGTAAGAT

Downstream 100 bases:

>100_bases
AATCCGGCATGCAGCCGACAGCACACAAGATTAAGACATGGATCGTTTCGAAATTGCCATTTGCGGCGGCGGAGTGGGCG
GTTTGACCGCGGCGCTGGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSTTTVNAPASPSRPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGELGRMYRRENLIPNILSTALYT
VLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPKVAFAPLFIMWFGYNATPKLLVTVLIVFFPVLVNVLAAMKT
VDRDMVNLARAYNLSRWQIFLKVQFPSTLPNLLAGLRISSTLAVIGVTVGELVGGNTGLGFLIAYGGGQANAAMVFNAII
LLTIIGIALYSVLAWAEERLLHYIPKSHIS

Sequences:

>Translated_270_residues
MSTTTVNAPASPSRPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGELGRMYRRENLIPNILSTALYT
VLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPKVAFAPLFIMWFGYNATPKLLVTVLIVFFPVLVNVLAAMKT
VDRDMVNLARAYNLSRWQIFLKVQFPSTLPNLLAGLRISSTLAVIGVTVGELVGGNTGLGFLIAYGGGQANAAMVFNAII
LLTIIGIALYSVLAWAEERLLHYIPKSHIS
>Mature_269_residues
STTTVNAPASPSRPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGELGRMYRRENLIPNILSTALYTV
LGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPKVAFAPLFIMWFGYNATPKLLVTVLIVFFPVLVNVLAAMKTV
DRDMVNLARAYNLSRWQIFLKVQFPSTLPNLLAGLRISSTLAVIGVTVGELVGGNTGLGFLIAYGGGQANAAMVFNAIIL
LTIIGIALYSVLAWAEERLLHYIPKSHIS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=170, Percent_Identity=32.3529411764706, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786564, Length=190, Percent_Identity=30, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29274; Mature: 29142

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTVNAPASPSRPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGEL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHH
GRMYRRENLIPNILSTALYTVLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VAFAPLFIMWFGYNATPKLLVTVLIVFFPVLVNVLAAMKTVDRDMVNLARAYNLSRWQIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LKVQFPSTLPNLLAGLRISSTLAVIGVTVGELVGGNTGLGFLIAYGGGQANAAMVFNAII
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH
LLTIIGIALYSVLAWAEERLLHYIPKSHIS
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
STTTVNAPASPSRPAVLQPHVLIGLLILSAVLLIWEFLPPALGVPRFIIPTISDMAGEL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHH
GRMYRRENLIPNILSTALYTVLGFAIGSMLGAIIGYLLGLSRFWEKVLSPYILALQIAPK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VAFAPLFIMWFGYNATPKLLVTVLIVFFPVLVNVLAAMKTVDRDMVNLARAYNLSRWQIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LKVQFPSTLPNLLAGLRISSTLAVIGVTVGELVGGNTGLGFLIAYGGGQANAAMVFNAII
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH
LLTIIGIALYSVLAWAEERLLHYIPKSHIS
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]