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The map label for this gene is ubiF [C]

Identifier: 110633170

GI number: 110633170

Start: 901864

End: 902997

Strand: Reverse

Name: ubiF [C]

Synonym: Meso_0813

Alternate gene names: 110633170

Gene position: 902997-901864 (Counterclockwise)

Preceding gene: 110633171

Following gene: 110633169

Centisome position: 20.46

GC content: 64.29

Gene sequence:

>1134_bases
ATGGATCGTTTCGAAATTGCCATTTGCGGCGGCGGAGTGGGCGGTTTGACCGCGGCGCTGGCGCTGACCAAAATCGGACA
TAGGGTGACGGTTTTCGAGCGCGCGGAAAAGTTCCTGCGCATCGGTGCCGACGTCAACCTCACGCCCAACGCCGTGAAGG
CGCTGGACGGGCTGGGGATCGGCGAGCGCCTGCGCAAGACCGCCGCGCGCCCCGCCTACCGCATCAGCCGCACCTGGGAC
ACCGGGGAAGAGACATCGCGCTTGCCCATGAGCGTGGCAGCCGAAGAAAAATATGGCGCACCCCAACTCACGATCCATCG
CGGCGACCTGCTGCAGGCGATGGAAGAGGCTATTGACCCCGCATGCATCCGGCTCGGCCATCAGGCGGAATCCGTCAATG
TGGACGGCGCGCGGCCCGTCGTCACCTTTGCGGACGGCAAGGCGGAGAGCTTCGATCTGGTGATCGGTGCCGACGGCATC
CATTCGGCGGTGCGCACGAGCCTTTTCGGCGCCGACGCGCCCGAGTTCACGGGGCTGGTGTCCTACCGCTCGGTGATCGA
GAGCAAGGATGTGGACGTGCCCAATCTCGATTGCTTCACCAAATGGTGGGGCCCGACGCCTGACATGCAGATCGTCACCT
TCCCCTTGCTTCGCGGAGAAGAGCTTTTCGTCTTCGCCACCACCTCGCAGCCCGAATGGACGGCCGAGAGCTGGACGATG
CCTGGGGAGGTGGAAGAGTTGCGCGCCGTTTATGCCGATTTCCACCCCGAGGTCCAGAAGATCCTCGCTGCCTGCACCAG
CGTTACCAAGTCGGCCCTCTATGTGCGCAAGCCGTTTGCGCAGTGGAGCCGTGGCGGAGCAACGATCCTCGGCGATGCCG
CCCATCCGATGGTGCCGTTCATGGCGCAGGGAGCCTGCATGGCGATCGAGGATGCCATCGTCCTCGCGCGCGTGCTCCAG
GGCGCTGCGCTGGCCGAAATTCCGCTGCGCCTCAAGACCTATGAGGAGTTGCGCAAGCCCCGCACCAGTCAGGTCCAGGA
AGGCTCTCGGGCGAACAACTGGCTCAAGGGCCAGGGCAACGCTGACTGGGTCTATGGTTATGACGCCTGGAGGCTGGCCA
TACCGTCCTCTTGA

Upstream 100 bases:

>100_bases
AGCGTCCTGGCCTGGGCCGAGGAACGGCTGCTGCACTACATCCCCAAATCCCACATTTCCTAAAATCCGGCATGCAGCCG
ACAGCACACAAGATTAAGAC

Downstream 100 bases:

>100_bases
TCCAGAGTTGACAAGAAAGGCCCGGTCGACAACCGGGCTTTTTTTGGCGTCAGATCTGACCGGTAGGCGCGTTCGTGCCA
CGGAATGACGAAGGTGCTCA

Product: monooxygenase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MDRFEIAICGGGVGGLTAALALTKIGHRVTVFERAEKFLRIGADVNLTPNAVKALDGLGIGERLRKTAARPAYRISRTWD
TGEETSRLPMSVAAEEKYGAPQLTIHRGDLLQAMEEAIDPACIRLGHQAESVNVDGARPVVTFADGKAESFDLVIGADGI
HSAVRTSLFGADAPEFTGLVSYRSVIESKDVDVPNLDCFTKWWGPTPDMQIVTFPLLRGEELFVFATTSQPEWTAESWTM
PGEVEELRAVYADFHPEVQKILAACTSVTKSALYVRKPFAQWSRGGATILGDAAHPMVPFMAQGACMAIEDAIVLARVLQ
GAALAEIPLRLKTYEELRKPRTSQVQEGSRANNWLKGQGNADWVYGYDAWRLAIPSS

Sequences:

>Translated_377_residues
MDRFEIAICGGGVGGLTAALALTKIGHRVTVFERAEKFLRIGADVNLTPNAVKALDGLGIGERLRKTAARPAYRISRTWD
TGEETSRLPMSVAAEEKYGAPQLTIHRGDLLQAMEEAIDPACIRLGHQAESVNVDGARPVVTFADGKAESFDLVIGADGI
HSAVRTSLFGADAPEFTGLVSYRSVIESKDVDVPNLDCFTKWWGPTPDMQIVTFPLLRGEELFVFATTSQPEWTAESWTM
PGEVEELRAVYADFHPEVQKILAACTSVTKSALYVRKPFAQWSRGGATILGDAAHPMVPFMAQGACMAIEDAIVLARVLQ
GAALAEIPLRLKTYEELRKPRTSQVQEGSRANNWLKGQGNADWVYGYDAWRLAIPSS
>Mature_377_residues
MDRFEIAICGGGVGGLTAALALTKIGHRVTVFERAEKFLRIGADVNLTPNAVKALDGLGIGERLRKTAARPAYRISRTWD
TGEETSRLPMSVAAEEKYGAPQLTIHRGDLLQAMEEAIDPACIRLGHQAESVNVDGARPVVTFADGKAESFDLVIGADGI
HSAVRTSLFGADAPEFTGLVSYRSVIESKDVDVPNLDCFTKWWGPTPDMQIVTFPLLRGEELFVFATTSQPEWTAESWTM
PGEVEELRAVYADFHPEVQKILAACTSVTKSALYVRKPFAQWSRGGATILGDAAHPMVPFMAQGACMAIEDAIVLARVLQ
GAALAEIPLRLKTYEELRKPRTSQVQEGSRANNWLKGQGNADWVYGYDAWRLAIPSS

Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.114 [H]

Molecular weight: Translated: 41079; Mature: 41079

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFEIAICGGGVGGLTAALALTKIGHRVTVFERAEKFLRIGADVNLTPNAVKALDGLGI
CCCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCH
GERLRKTAARPAYRISRTWDTGEETSRLPMSVAAEEKYGAPQLTIHRGDLLQAMEEAIDP
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECHHHCCCCEEEEECCHHHHHHHHHCCH
ACIRLGHQAESVNVDGARPVVTFADGKAESFDLVIGADGIHSAVRTSLFGADAPEFTGLV
HHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHH
SYRSVIESKDVDVPNLDCFTKWWGPTPDMQIVTFPLLRGEELFVFATTSQPEWTAESWTM
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCC
PGEVEELRAVYADFHPEVQKILAACTSVTKSALYVRKPFAQWSRGGATILGDAAHPMVPF
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHH
MAQGACMAIEDAIVLARVLQGAALAEIPLRLKTYEELRKPRTSQVQEGSRANNWLKGQGN
HHCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
ADWVYGYDAWRLAIPSS
CCEEEECCEEEEECCCC
>Mature Secondary Structure
MDRFEIAICGGGVGGLTAALALTKIGHRVTVFERAEKFLRIGADVNLTPNAVKALDGLGI
CCCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCH
GERLRKTAARPAYRISRTWDTGEETSRLPMSVAAEEKYGAPQLTIHRGDLLQAMEEAIDP
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECHHHCCCCEEEEECCHHHHHHHHHCCH
ACIRLGHQAESVNVDGARPVVTFADGKAESFDLVIGADGIHSAVRTSLFGADAPEFTGLV
HHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHH
SYRSVIESKDVDVPNLDCFTKWWGPTPDMQIVTFPLLRGEELFVFATTSQPEWTAESWTM
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCC
PGEVEELRAVYADFHPEVQKILAACTSVTKSALYVRKPFAQWSRGGATILGDAAHPMVPF
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHH
MAQGACMAIEDAIVLARVLQGAALAEIPLRLKTYEELRKPRTSQVQEGSRANNWLKGQGN
HHCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
ADWVYGYDAWRLAIPSS
CCEEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA