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The map label for this gene is 110633156

Identifier: 110633156

GI number: 110633156

Start: 887644

End: 888516

Strand: Direct

Name: 110633156

Synonym: Meso_0799

Alternate gene names: NA

Gene position: 887644-888516 (Clockwise)

Preceding gene: 110633152

Following gene: 110633157

Centisome position: 20.12

GC content: 58.19

Gene sequence:

>873_bases
ATGCGCGCTTACAGGGCATGGCCAAACGGCAAGAAGGTCGCCGTCTCGGTGACGGTGATGTTCGAAACATGGTCGGACGA
AGCAGCACCAAACTACTCCGTCCAGGCGACGAGCCTCAAGTCCGGAACGGTCGACCATGCTGCCAAAGCCTGGTCCACTT
ATGGCGGGCGCGTCGGTGTGTGGAGGCTCAACAGGCTTCTGACGAAGCATGGCATTCGCGGAACCTTCTTCACCAATGGG
CGCTGTGCGGAATTATATCCGGACGCCGTTCGCCAGCTGGTCGCCTCCGGGCATGACCTGGCAGCCCACTCCTACACTCA
CGATTCAATTCTTGCCTATATGAGCTTGGACGAACAACGTGAAATGATCCGGCGGAGCGTTGGCCTGCTGGAGGACTGCA
CCGGCAGGAAAGTGAAGGGTTGGGGCAGCCCAGCCGTCGCATTCACTCCAGAAACGGCAGGCTTCCTCGCACAGCAGGGG
CTTTCGTGGACCTGCGACATCACCTATGTCGACCTGCCGATCCGAATTCGAACGGCATATGGGGATATTGCGGGCGTGCC
GACTACCGATTTTTCGGATAACCGCGTTCTGAAGGCGAATACCTGGGACCTCGCCGACGTCTACAAGGGTATGATGAATT
ATCTGCGCGAGAACGAGCCGATGAGCATGCTCACCATGGTCATACACTGCCAGTTCGGTGGCCGGCCGCTGGTTTCCGCG
GTAATCGACGAGATACTGAAATACTTCAAGAGCTTCGATGATGTCTGGTTCGCCACGCATGATGAGCTGGCACAGTGGGC
CCTCGAAGCACAAGCCGACGAGTGCACCTATGCCGATCGGTATTTCAACGAGGAAGCGCGAGCACGCGCCTGA

Upstream 100 bases:

>100_bases
GCCTCAAAAGCATAGTAGGAATACCTCTTATATCTTAGACGAATAGGGGCGCAAAAGCTACTTCTTCCCCTGCAAGGCAG
GTCTCGAGGGGAGGAAATTT

Downstream 100 bases:

>100_bases
TCCGCAATACCCGTGGTGAGGATGGTGCGGCGGATGGAGGCCCTGGATGAGGACCGTAGCGATGCGATTGGCTGCGGAGG
GCATGCCCCTGCCGCACGCG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitin Deacetylase; Chitooligosaccharide Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Saccharide Deacetylase Slightly; Hydrolase; Cyclic Imide Hydrolase; PEP-CTERM Locus Polysaccharide Deactylase; Deacetylase

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRAYRAWPNGKKVAVSVTVMFETWSDEAAPNYSVQATSLKSGTVDHAAKAWSTYGGRVGVWRLNRLLTKHGIRGTFFTNG
RCAELYPDAVRQLVASGHDLAAHSYTHDSILAYMSLDEQREMIRRSVGLLEDCTGRKVKGWGSPAVAFTPETAGFLAQQG
LSWTCDITYVDLPIRIRTAYGDIAGVPTTDFSDNRVLKANTWDLADVYKGMMNYLRENEPMSMLTMVIHCQFGGRPLVSA
VIDEILKYFKSFDDVWFATHDELAQWALEAQADECTYADRYFNEEARARA

Sequences:

>Translated_290_residues
MRAYRAWPNGKKVAVSVTVMFETWSDEAAPNYSVQATSLKSGTVDHAAKAWSTYGGRVGVWRLNRLLTKHGIRGTFFTNG
RCAELYPDAVRQLVASGHDLAAHSYTHDSILAYMSLDEQREMIRRSVGLLEDCTGRKVKGWGSPAVAFTPETAGFLAQQG
LSWTCDITYVDLPIRIRTAYGDIAGVPTTDFSDNRVLKANTWDLADVYKGMMNYLRENEPMSMLTMVIHCQFGGRPLVSA
VIDEILKYFKSFDDVWFATHDELAQWALEAQADECTYADRYFNEEARARA
>Mature_290_residues
MRAYRAWPNGKKVAVSVTVMFETWSDEAAPNYSVQATSLKSGTVDHAAKAWSTYGGRVGVWRLNRLLTKHGIRGTFFTNG
RCAELYPDAVRQLVASGHDLAAHSYTHDSILAYMSLDEQREMIRRSVGLLEDCTGRKVKGWGSPAVAFTPETAGFLAQQG
LSWTCDITYVDLPIRIRTAYGDIAGVPTTDFSDNRVLKANTWDLADVYKGMMNYLRENEPMSMLTMVIHCQFGGRPLVSA
VIDEILKYFKSFDDVWFATHDELAQWALEAQADECTYADRYFNEEARARA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32582; Mature: 32582

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAYRAWPNGKKVAVSVTVMFETWSDEAAPNYSVQATSLKSGTVDHAAKAWSTYGGRVGV
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEHH
WRLNRLLTKHGIRGTFFTNGRCAELYPDAVRQLVASGHDLAAHSYTHDSILAYMSLDEQR
HHHHHHHHHCCCCEEEEECCEEHHCCHHHHHHHHHCCCCHHHCCCCHHHEEEECCCHHHH
EMIRRSVGLLEDCTGRKVKGWGSPAVAFTPETAGFLAQQGLSWTCDITYVDLPIRIRTAY
HHHHHHHCHHHHCCCCCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEEEEECEEEEEECC
GDIAGVPTTDFSDNRVLKANTWDLADVYKGMMNYLRENEPMSMLTMVIHCQFGGRPLVSA
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHH
VIDEILKYFKSFDDVWFATHDELAQWALEAQADECTYADRYFNEEARARA
HHHHHHHHHHCCCHHEECCHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCC
>Mature Secondary Structure
MRAYRAWPNGKKVAVSVTVMFETWSDEAAPNYSVQATSLKSGTVDHAAKAWSTYGGRVGV
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEHH
WRLNRLLTKHGIRGTFFTNGRCAELYPDAVRQLVASGHDLAAHSYTHDSILAYMSLDEQR
HHHHHHHHHCCCCEEEEECCEEHHCCHHHHHHHHHCCCCHHHCCCCHHHEEEECCCHHHH
EMIRRSVGLLEDCTGRKVKGWGSPAVAFTPETAGFLAQQGLSWTCDITYVDLPIRIRTAY
HHHHHHHCHHHHCCCCCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEEEEECEEEEEECC
GDIAGVPTTDFSDNRVLKANTWDLADVYKGMMNYLRENEPMSMLTMVIHCQFGGRPLVSA
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHH
VIDEILKYFKSFDDVWFATHDELAQWALEAQADECTYADRYFNEEARARA
HHHHHHHHHHCCCHHEECCHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA